RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 UBCP0CG48 685 aaKnown RBP12.85□□□□□ -0.35
CD99-211ENST00000623253 FAM106CPP0CH98 169 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 GDNFP39905 211 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 GLIPR1P48060 266 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 THBS3P49746 956 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 PRRX1P54821 245 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 MTCP1P56278 107 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 SCN1BQ07699 218 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 AESQ08117 197 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 SPIN3Q5JUX0 258 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 OR4D6Q8NGJ1 314 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 TFAP2CQ92754 450 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 SEBOXQ9HB31 216 aaPredicted RBP12.85□□□□□ -0.35
CD99-211ENST00000623253 EXOSC4Q9NPD3 245 aaKnown RBP12.85□□□□□ -0.35
CD99-211ENST00000623253 IMPAD1Q9NX62 359 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 GNG8Q9UK08 70 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 HHLA2Q9UM44 414 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 ORC6Q9Y5N6 252 aa12.85□□□□□ -0.35
CD99-211ENST00000623253 DNAH9Q9NYC9 4486 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 OR2H2O95918 312 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 OCM2P0CE71 109 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 OCMP0CE72 109 aaPredicted RBP12.84□□□□□ -0.35
CD99-211ENST00000623253 NFYBP25208 207 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 RAB25P57735 213 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 ISL1P61371 349 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 RPL23AP62750 156 aaKnown RBP12.84□□□□□ -0.35
CD99-211ENST00000623253 DGCR2P98153 550 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 ZNF85Q03923 595 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 ZNF146Q15072 292 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 HLA-DRB5Q30154 266 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 KIAA2026Q5HYC2 2103 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 C18orf65Q6ZTR6 163 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 PRSS35Q8N3Z0 413 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 PYDC1Q8WXC3 89 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 TAS2R3Q9NYW6 316 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 MOB4Q9Y3A3 225 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 HSPE1-MOB4S4R3N1 261 aa12.84□□□□□ -0.35
CD99-211ENST00000623253 LOC107986453A0A1B0GWG9 222 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 ZNF44P15621 663 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 PTGFRP43088 359 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 HES1Q14469 280 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 HNF4GQ14541 408 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 KLHL30-AS1Q8NEE0 82 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 CORO2AQ92828 525 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
CD99-211ENST00000623253 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.36
CD99-211ENST00000623253 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 U3KQK5 164 aa12.83□□□□□ -0.36
CD99-211ENST00000623253 ODAMA1E959 279 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 SERPINE3A8MV23 424 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 LY6LH3BQJ8 138 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 ALPLP05186 524 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 SNRNP70P08621 437 aaKnown RBP12.82□□□□□ -0.36
CD99-211ENST00000623253 LMO1P25800 156 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 MYCNOSP40205 109 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 KIR3DL2P43630 455 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 SNRPGP62308 76 aaKnown RBP12.82□□□□□ -0.36
CD99-211ENST00000623253 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 SLC25A30Q5SVS4 291 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 UTF1Q5T230 341 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 TMEM244Q5VVB8 128 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 MEDAGQ5VYS4 303 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 OR56B4Q8NH76 319 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 CHPT1Q8WUD6 406 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 TOMM40LQ969M1 308 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 RPEQ96AT9 228 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 RNFT2Q96EX2 444 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 ADAT3Q96EY9 351 aaPredicted RBP12.82□□□□□ -0.36
CD99-211ENST00000623253 HRASLS5Q96KN8 279 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 DUX3Q96PT4 197 aa12.82□□□□□ -0.36
CD99-211ENST00000623253 IGKV1-9A0A0C4DH69 117 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 SNTNA6NMZ2 147 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 EI24O14681 340 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 IGHV3-7P01780 117 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
CD99-211ENST00000623253 ZNF20P17024 532 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 ATF1P18846 271 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 PRKACBP22694 351 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 CD34P28906 385 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 SLC35B1P78383 322 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 ZFP1Q6P2D0 407 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 FDX2Q6P4F2 183 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CD99-211ENST00000623253 FGGYQ96C11 551 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
CD99-211ENST00000623253 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms