RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CDH23Q9H251 3354 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 MEX3AA1L020 520 aaKnown RBP8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 NKX2-6A6NCS4 301 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 CCDC85CA6NKD9 419 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 K7N7A8 449 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF205O95201 554 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 SYNGR4O95473 234 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 WNT2P09544 360 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 BCL3P20749 454 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 NFYBP25208 207 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 GNRHRP30968 328 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 ARR3P36575 388 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 CAMLGP49069 296 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 CLDN18P56856 261 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 EWSR1Q01844 656 aaKnown RBP eCLIP8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 GNMTQ14749 295 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 PDCD1Q15116 288 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 GUK1Q16774 197 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 CEACAM21Q3KPI0 293 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 LINC00596Q86U02 117 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 MKXQ8IYA7 352 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZDHHC23Q8IYP9 409 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC35G3Q8N808 338 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 LFNGQ8NES3 379 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR8G5Q8NG78 346 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR2M7Q8NG81 312 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR5A2Q8NGI9 324 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 RXFP4Q8TDU9 374 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 IL22RA2Q969J5 263 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 APOBEC3DQ96AK3 386 aaPredicted RBP8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 BOD1Q96IK1 185 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 RIMS4Q9H426 269 aaPredicted RBP8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 OPA3Q9H6K4 179 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 TUBA4BQ9H853 241 aa8.26□□□□□ -1.09
IGHV3-54-201ENST00000622166 KIR2DS1A0A191URI9 304 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 AGPAT2O15120 278 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 PITX3O75364 302 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR7C1O76099 320 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 PDGFBP01127 241 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 IFNA4P05014 189 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 CRYBA1P05813 215 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 UCP1P25874 307 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 KIR2DS4P43632 304 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 NKX2-1P43699 371 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 NHLH2Q02577 135 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 KIR2DS1Q14954 304 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 RNF212Q495C1 297 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 MIDNQ504T8 468 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGSF11Q5DX21 431 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF880Q6PDB4 577 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 CLEC9AQ6UXN8 241 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 MRPL21Q7Z2W9 205 aaKnown RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 TBC1D26Q86UD7 250 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR2C3Q8N628 320 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF565Q8N9K5 539 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 SECTM1Q8WVN6 248 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLAMF9Q96A28 289 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 THOC3Q96J01 351 aaKnown RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 CDX2Q99626 313 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 STRADBQ9C0K7 418 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 PLK3Q9H4B4 646 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF703Q9H7S9 590 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 PLEKHF2Q9H8W4 249 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 CRIM1Q9NZV1 1036 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 LRFN1Q9P244 771 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 B4GALT7Q9UBV7 327 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 UBE2J1Q9Y385 318 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 RTTNQ86VV8 2226 aa8.25□□□□□ -1.09
IGHV3-54-201ENST00000622166 IGSF23A1L1A6 192 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 FAM24AA6NFZ4 105 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 SLC22A20A6NK97 555 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF732B4DXR9 585 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 TRAPPC2LH3BP13 241 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 NME2P1O60361 137 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 NEURL1O76050 574 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 TK1P04183 234 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 ID3Q02535 119 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 RNPS1Q15287 305 aaKnown RBP8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 NMSQ5H8A3 153 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 SP5Q6BEB4 398 aaPredicted RBP8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 ZNF695Q8IW36 515 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 OR5D13Q8NGL4 314 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 LILRB1Q8NHL6 650 aaPredicted RBP8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 PLPPR1Q8TBJ4 325 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 POM121L2Q96KW2 1035 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 PBDC1Q9BVG4 233 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 PAPOLGQ9BWT3 736 aaKnown RBP8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 PRRG4Q9BZD6 226 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 IFT22Q9H7X7 185 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 SPACA1Q9HBV2 294 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 COA4Q9NYJ1 87 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 MTCH1Q9NZJ7 389 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 ATP23Q9Y6H3 246 aa8.24□□□□□ -1.09
IGHV3-54-201ENST00000622166 DOCK10Q96BY6 2186 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms