RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KLHL12Q53G59 568 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 PAGE3Q5JUK9 113 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 C1orf195Q5TG92 126 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 RPL13AP3Q6NVV1 102 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 FAM183BPQ6ZVS7 135 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 HIST2H3AQ71DI3 136 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 GALNT10Q86SR1 603 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 C1orf158Q8N1D5 194 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 DCAF4L2Q8NA75 395 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 OR4F15Q8NGB8 312 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 OR51G1Q8NGK1 321 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 OR1L8Q8NGR8 309 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 OR13D1Q8NGV5 346 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 OR4X1Q8NH49 305 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 NT5CQ8TCD5 201 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SLC37A2Q8TED4 501 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM230Q96A57 120 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 CLDN23Q96B33 292 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 PPCDCQ96CD2 204 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 HAUS1Q96CS2 278 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SULT4A1Q9BR01 284 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 MED18Q9BUE0 208 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 ARV1Q9H2C2 271 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SPNS1Q9H2V7 528 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 FBXL15Q9H469 300 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 VSIRQ9H7M9 311 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
BRCA1-229ENST00000621897 DDIT4Q9NX09 232 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 KCNIP1Q9NZI2 227 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SPRR3Q9UBC9 169 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 ANXA10Q9UJ72 324 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF225Q9UK10 706 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 TP53TG5Q9Y2B4 290 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 SLC35A3Q9Y2D2 325 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF257Q9Y2Q1 563 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 UFC1Q9Y3C8 167 aa2.61□□□□□ -1.99
BRCA1-229ENST00000621897 MTCL1Q9Y4B5 1905 aaKnown RBP2.61□□□□□ -1.99
BRCA1-229ENST00000621897 DENND4AQ7Z401 1863 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CNTLNQ9NXG0 1405 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 MRC2Q9UBG0 1479 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 IGLV3-16A0A075B6K0 115 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 IGKV1D-8A0A087WSZ0 117 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 A0A087WUJ7 227 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 IGKV6-21A0A0C4DH24 114 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 A0A0G2JLM5 398 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 A0A0U1RQV1 116 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 FAM159BA6NKW6 160 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 ZNF726A6NNF4 738 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 LINC00587B1AMM8 73 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 E9PLD3 99 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 LINC01619G3V211 115 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 STK16O75716 305 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR7C1O76099 320 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 ATG12O94817 140 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 GPR75O95800 540 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SLC25A27O95847 323 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PTHP01270 115 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CRYGDP07320 174 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SLC35G6P0C7Q6 338 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 RCC1P18754 421 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PSMB9P28065 219 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 S100GP29377 79 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 ERP29P30040 261 aaKnown RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TSPOP30536 169 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 GCKP35557 465 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 KIR2DS2P43631 304 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PPICP45877 212 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 BIDP55957 195 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 RAB2AP61019 212 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 MXD1Q05195 221 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 IRF4Q15306 451 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 MPPED2Q15777 294 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 WHAMMP3Q1A5X7 153 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CEACAM16Q2WEN9 425 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 ACSBG2Q5FVE4 666 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 FAM78BQ5VT40 261 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 LAMTOR1Q6IAA8 161 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR2T5Q6IEZ7 315 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 C11orf71Q6IPW1 123 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SFXN4Q6P4A7 337 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 RASSF6Q6ZTQ3 369 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 COMMD7Q86VX2 200 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PPP1R27Q86WC6 154 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CBR4Q8N4T8 237 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM86BQ8N661 226 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 COX18Q8N8Q8 333 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR2T29Q8NH02 315 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR1P1Q8NH06 330 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 LHFPL5Q8TAF8 219 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR51E1Q8TCB6 317 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SKA2Q8WVK7 121 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TNFAIP8L1Q8WVP5 186 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TAMM41Q96BW9 452 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 BTN2A3PQ96KV6 586 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PGLYRP3Q96LB9 341 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PITX2Q99697 317 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CMSS1Q9BQ75 279 aaKnown RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 GINS3Q9BRX5 216 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 KIFC1Q9BW19 673 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms