RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 IGLV3-32A0A0A0MS00 114 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 TRGV10A0A0A0MS01 117 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 CDIPTO14735 213 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 SFTPCP11686 197 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 ADRA2CP18825 462 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
CIITA-213ENST00000618327 TNFSF10P50591 281 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 ZNF92Q03936 586 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 OR5AP2Q8NGF4 316 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 ZNRF4Q8WWF5 429 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
CIITA-213ENST00000618327 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
CIITA-213ENST00000618327 C19orf57Q0VDD7 668 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 CD3EP07766 207 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 SLC36A1Q7Z2H8 476 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 S1PR3Q99500 378 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 PIN1P1O15428 100 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 NTF3P20783 257 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 RPUSD3Q6P087 351 aaKnown RBP12.1□□□□□ -0.47
CIITA-213ENST00000618327 IL34Q6ZMJ4 242 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 PPP1R14DQ9NXH3 145 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
CIITA-213ENST00000618327 TRAV20A0A0B4J274 112 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 J3QT63 122 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 GPR31O00270 319 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 NPIPB7O75200 414 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 CLPSP04118 112 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 MDH2P40926 338 aaKnown RBP12.09□□□□□ -0.47
CIITA-213ENST00000618327 FDX2Q6P4F2 183 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 RBMXL3Q8N7X1 1067 aaKnown RBP12.09□□□□□ -0.47
CIITA-213ENST00000618327 PPP1R1CQ8WVI7 109 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 LHX4Q969G2 390 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 VAMP3Q15836 100 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 PRAMEF6Q5VXH4 476 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
CIITA-213ENST00000618327 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 ABCD4O14678 606 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 OR10X1Q8NGY0 326 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 CCL17Q92583 94 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 PTX4Q96A99 478 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 G6PC2Q9NQR9 355 aa12.09□□□□□ -0.47
CIITA-213ENST00000618327 CACNA1GO43497 2377 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 CCL21O00585 134 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 HEXAP06865 529 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 BCL3P20749 454 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 UNQ9370/PRO34162Q6UXP9 181 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 TPPP3Q9BW30 176 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 V9GYS6 101 aa12.08□□□□□ -0.47
CIITA-213ENST00000618327 IGKV1D-43A0A0B4J1Z2 117 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 RFPL4AA6NLU0 287 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 C3orf80F5H4A9 247 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 RFPL4AL1F8VTS6 287 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 J3QR89 54 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.48
CIITA-213ENST00000618327 PLA2G10O15496 165 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 NDUFB3O43676 98 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 DHODHQ02127 395 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 ST3GAL2Q16842 350 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 ZNF362Q5T0B9 420 aaPredicted RBP12.08□□□□□ -0.48
CIITA-213ENST00000618327 PRR7Q8TB68 274 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 C2orf50Q96LR7 162 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 DLL4Q9NR61 685 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 MRPS18CQ9Y3D5 142 aaKnown RBP12.08□□□□□ -0.48
CIITA-213ENST00000618327 NQO2P16083 231 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 MST1P26927 711 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 DHRS2Q13268 280 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 WDR13Q9H1Z4 485 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CBY3A6NI87 242 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 LMX1BO60663 402 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CT45A5P0DMU8 189 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CT45A7P0DMV0 189 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 ZBTB25P24278 435 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 ZNF90Q03938 601 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 RPUSD4Q96CM3 377 aaKnown RBP12.08□□□□□ -0.48
CIITA-213ENST00000618327 SCNM1Q9BWG6 230 aa12.08□□□□□ -0.48
CIITA-213ENST00000618327 E5RGE8 158 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms