RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RNF122Q9H9V4 155 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 HSF4Q9ULV5 492 aa10.64□□□□□ -0.71
CIITA-212ENST00000618207 ANKRD30BLA7E2S9 258 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 SIGLEC5O15389 551 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 ZNF728P0DKX0 622 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 RTL6Q6ICC9 239 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 ZNF585AQ6P3V2 769 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 SDHAF2Q9NX18 166 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 A0A0D9SG52 128 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 IFNA2P01563 188 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 OR5AC1P0C628 307 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 HLA-GP17693 338 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 TCF15Q12870 199 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 FOXF2Q12947 444 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 IAH1Q2TAA2 248 aaPredicted RBP10.63□□□□□ -0.71
CIITA-212ENST00000618207 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
CIITA-212ENST00000618207 MRPL24Q96A35 216 aaKnown RBP10.63□□□□□ -0.71
CIITA-212ENST00000618207 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 SCTP09683 121 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 CLEC9AQ6UXN8 241 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 CXorf67Q86X51 503 aaPredicted RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 PRR18Q8N4B5 295 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 RTN4IP1Q8WWV3 396 aaPredicted RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 RBPMSQ93062 196 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 LSM5Q9Y4Y9 91 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 OR2F2O95006 317 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 AADACP22760 399 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 OR2F1Q13607 317 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 SPIN3Q5JUX0 258 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 MEX3BQ6ZN04 569 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 SECTM1Q8WVN6 248 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 MRPS24Q96EL2 167 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 hCG_1807616A0A1W2PRN6 198 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 SLC25A4P12235 298 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 ZNF44P15621 663 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 CD82P27701 267 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 RBM39Q14498 530 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 PDZD9Q8IXQ8 264 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 C9orf106Q8NAJ2 232 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 NANOS1Q8WY41 292 aaKnown RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 GMPPAQ96IJ6 420 aaPredicted RBP10.62□□□□□ -0.71
CIITA-212ENST00000618207 TMEM68Q96MH6 324 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 CDH20Q9HBT6 801 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 RAB18Q9NP72 206 aa10.62□□□□□ -0.71
CIITA-212ENST00000618207 SLC33A1O00400 549 aaPredicted RBP10.61□□□□□ -0.71
CIITA-212ENST00000618207 BCL2L11O43521 198 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 COX5BP10606 129 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 DTYMKP23919 212 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 HERV-K104P61576 105 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 SRSF4Q08170 494 aaKnown RBP10.61□□□□□ -0.71
CIITA-212ENST00000618207 PPA1Q15181 289 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 NSUN5P2Q63ZY6 315 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 RGS7BPQ6MZT1 257 aaPredicted RBP10.61□□□□□ -0.71
CIITA-212ENST00000618207 TFAP2EQ6VUC0 442 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 OR1S1Q8NH92 325 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 ASB13Q8WXK3 278 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 SLC2A9Q9NRM0 540 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 C1orf123Q9NWV4 160 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 MEX3AA1L020 520 aaKnown RBP10.61□□□□□ -0.71
CIITA-212ENST00000618207 CA11O75493 328 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 DIRAS3O95661 229 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 GRPP07492 148 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 GLP1RP43220 463 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 FGF12P61328 243 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 FAM214BQ7L5A3 538 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 LYZL2Q7Z4W2 148 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 C2orf50Q96LR7 162 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 LINC00052Q96N35 136 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 TAAR6Q96RI8 345 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 SMIM3Q9BZL3 60 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 NMES1Q9C002 83 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 IL36GQ9NZH8 169 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 AUP1Q9Y679 476 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 PLCE1Q9P212 2302 aa10.61□□□□□ -0.71
CIITA-212ENST00000618207 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 TRAV17A0A0B4J275 112 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 PHF1O43189 567 aaPredicted RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 RCC1P18754 421 aaPredicted RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 AKR1D1P51857 326 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 CYCSP99999 105 aaKnown RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 FLI1Q01543 452 aaPredicted RBP10.6□□□□□ -0.71
CIITA-212ENST00000618207 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 GGNBP1Q5YKI7 109 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 C20orf204Q6ZNR8 217 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 OR5A2Q8NGI9 324 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 IL1F10Q8WWZ1 152 aa10.6□□□□□ -0.71
CIITA-212ENST00000618207 KIF25Q9UIL4 384 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms