RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ANXA10Q9UJ72 324 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 CNOT1A5YKK6 2376 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 EPHA8P29322 1005 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 LINC00303Q3SY05 128 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 WDR38Q5JTN6 314 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SLC35E4Q6ICL7 350 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 CLEC9AQ6UXN8 241 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 RFESDQ8TAC1 157 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 NUDT8Q8WV74 236 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 HEXA-AS1Q9H8Q6 139 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 DNAJB12Q9NXW2 375 aaKnown RBP9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 SOX15O60248 233 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 GUCA2AQ02747 115 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 GUK1Q16774 197 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 RIMKLAQ8IXN7 391 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 UBALD1Q8TB05 177 aa9.91□□□□□ -0.82
CCDC144B-208ENST00000618081 ITGBL1O95965 494 aaPredicted RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 UBE2L3P68036 154 aaKnown RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 TOMM20LQ6UXN7 152 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 LIAT1Q6ZQX7 453 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 Q7L0L9 218 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 TCTEX1D1Q8N7M0 179 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 FADS6Q8N9I5 356 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 BCL7CQ8WUZ0 217 aaPredicted RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 YIPF6Q96EC8 236 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 KIR2DL1P43626 348 aaPredicted RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 KIR2DL2P43627 348 aaPredicted RBP9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 CEBPEQ15744 281 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 MAP6Q96JE9 813 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 U3KQ87 197 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 CD40P25942 277 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 FMODQ06828 376 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 C9orf50Q5SZB4 431 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 SPICQ8N5J4 248 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 PTP4A1Q93096 173 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 UBE2L6O14933 153 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 DNPH1O43598 174 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 ASB10Q8WXI3 467 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 MIEN1Q9BRT3 115 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 SPNS1Q9H2V7 528 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 ASB1Q9Y576 335 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 IGHV1OR15-9A0A0B4J2B8 117 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 C5orf52A6NGY3 159 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 SPINK9Q5DT21 86 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 FAM27D1Q5T7N8 215 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 C1orf174Q8IYL3 243 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 TRAPPC4Q9Y296 219 aa9.9□□□□□ -0.82
CCDC144B-208ENST00000618081 C9orf170A2RU37 121 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 PRSS1P07477 247 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 YBX1P67809 324 aaKnown RBP9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 PMS2P11Q13670 270 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF273Q14593 569 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 CLEC2AQ6UVW9 174 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 CYB5R1Q9UHQ9 305 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 HMX2A2RU54 273 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 SMIM18P0DKX4 95 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 C6orf201Q7Z4U5 140 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 FAM219AQ8IW50 185 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 RELL2Q8NC24 303 aaPredicted RBP9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 TMEM171Q8WVE6 324 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 ASCL3Q9NQ33 180 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 PIPOXQ9P0Z9 390 aa9.9□□□□□ -0.83
CCDC144B-208ENST00000618081 A0A1W2PNV4 684 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF646O15015 1829 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ZXDAP98168 799 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OR8I2Q8N0Y5 310 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OR10G4Q8NGN3 311 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 OR10G7Q8NGN6 311 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 WSB1Q9Y6I7 421 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 MFSD2BA6NFX1 497 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 GSTZ1O43708 216 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 CCL2P13500 99 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 TEX261Q6UWH6 196 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 C12orf57Q99622 126 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 HAND1O96004 215 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 P01737 135 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ELOBQ15370 118 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 PRDM7Q9NQW5 492 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ZNF275Q9NSD4 429 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 IGHV3-43A0A0B4J1X8 118 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 MFNGO00587 321 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 ARG1P05089 322 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 IGHV3-43DP0DP04 118 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 HLA-GP17693 338 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 R3HDMLQ9H3Y0 253 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 COL18A1P39060 1754 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 M0R2Z0 102 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 PGFP49763 221 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 RELBQ01201 579 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 COL13A1Q5TAT6 717 aaPredicted RBP9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 LRP11Q86VZ4 500 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 MYOZ3Q8TDC0 251 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 FAM210BQ96KR6 192 aa9.89□□□□□ -0.83
CCDC144B-208ENST00000618081 LINC00052Q96N35 136 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms