RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C13orf42A0A1B0GVH6 325 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 C5orf51A6NDU8 294 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 CTSDP07339 412 aaPredicted RBP14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 ZNF83P51522 516 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 FAM209AQ5JX71 171 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 OR8G5Q8NG78 346 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 PPP1R1CQ8WVI7 109 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 SFXN3Q9BWM7 321 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 BCL2L14Q9BZR8 327 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 Q9N2K0 584 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 TIMM8AO60220 97 aaPredicted RBP14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 ADAP1O75689 374 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 CFDP00746 253 aaPredicted RBP14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 ZNF728P0DKX0 622 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 COQ8AQ8NI60 647 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 SPACA1Q9HBV2 294 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 POLDIP2Q9Y2S7 368 aa14.74□□□□□ -0.05
PCDHGC3-205ENST00000617641 NAAAQ02083 359 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 TIMM23BQ5SRD1 257 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 TMUB2Q71RG4 321 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 DOLPP1Q86YN1 238 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 FAM169BQ8N8A8 192 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 RDH8Q9NYR8 311 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 COMMD9Q9P000 198 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 PIEZO2Q9H5I5 2752 aa14.73□□□□□ -0.05
PCDHGC3-205ENST00000617641 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 M0R1B8 84 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 BMP5P22003 454 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 GLP1RP43220 463 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 ERVK11-1P61568 191 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 FGL1Q08830 312 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 ZNF718Q3SXZ3 478 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 GSG1LQ6UXU4 331 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 Q6ZR03 302 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 IFNA2P01563 188 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 HOXD4P09016 255 aaPredicted RBP14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 PGA5P0DJD9 388 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 ZNF44P15621 663 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 C4BPBP20851 252 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 KITLGP21583 273 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 AADACP22760 399 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 GCH1P30793 250 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 S100A11P31949 105 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 EXOSC2Q13868 293 aaKnown RBP14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 PRR30Q53SZ7 412 aaPredicted RBP14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 Q6P435 159 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 Q6ZS49 121 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 ZNF546Q86UE3 836 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 DHRS9Q9BPW9 319 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 NRIP2Q9BQI9 281 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 ARL6Q9H0F7 186 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 MSL2Q9HCI7 577 aa14.72□□□□□ -0.05
PCDHGC3-205ENST00000617641 HEATR1Q9H583 2144 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 TEX13DA0A0J9YY54 714 aaPredicted RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 CRYM-AS1A6NIL9 109 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 TMEM210A6NLX4 147 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 MPTX1A8MV57 137 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 PRRG2O14669 202 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 DEGS1O15121 323 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 NXPH2O95156 264 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 SCTP09683 121 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 FAM87AP0C7U9 286 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 TUBG1P23258 451 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 AP2S1P53680 142 aaPredicted RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 PIGPP57054 158 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 C20orf204Q6ZNR8 217 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 Q8IYB0 196 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 OR5T2Q8NGG2 359 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 MRPL30Q8TCC3 161 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 MOB3AQ96BX8 217 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 MFFQ9GZY8 342 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 RHOFQ9HBH0 211 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 RAB18Q9NP72 206 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 TUBG2Q9NRH3 451 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 SHANK1Q9Y566 2161 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 ATXN7L3Q14CW9 347 aaPredicted RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 MBNL2Q5VZF2 373 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 GFRALQ6UXV0 394 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 SGPP2Q8IWX5 399 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 IFT22Q9H7X7 185 aa14.71□□□□□ -0.05
PCDHGC3-205ENST00000617641 RP1L1Q8IWN7 2480 aaPredicted RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 ERVH48-1M5A8F1 160 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SIRPB1O00241 398 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 BET1O15155 118 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SNAPC5O75971 98 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 RPA2P15927 270 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 HERV-K104P61576 105 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 FAM27E3Q08E93 113 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SRSF7Q16629 238 aaKnown RBP eCLIP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 PHLDA2Q53GA4 152 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 ZNF826PQ6ZT77 177 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 MUCL1Q96DR8 90 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 CXXC4Q9H2H0 198 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SH3BGRL2Q9UJC5 107 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 MAP1BP46821 2468 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SLC34A2O95436 690 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR2H2O95918 312 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms