RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 LIAT1Q6ZQX7 453 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 DIRC2Q96SL1 478 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 ARL2-SNX15V9GYD0 113 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 AHRRA9YTQ3 701 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 SSX1Q16384 188 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 DMKNQ6E0U4 476 aaPredicted RBP17.72■□□□□ 0.43
CTDP1-208ENST00000613122 MUC20Q8N307 709 aaPredicted RBP17.72■□□□□ 0.43
CTDP1-208ENST00000613122 PLSCR3Q9NRY6 295 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 FRRS1LQ9P0K9 344 aa17.72■□□□□ 0.43
CTDP1-208ENST00000613122 MAP1BP46821 2468 aaKnown RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 ATP6V1FQ16864 119 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 CELA2AP08217 269 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 FAM214BQ7L5A3 538 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 SH2D2AQ9NP31 389 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 TXNDC12O95881 172 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 TAGLNQ01995 201 aaKnown RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 DHRS7BQ6IAN0 325 aaPredicted RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 TBC1D26Q86UD7 250 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 GVQW1Q8N7I0 195 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 PRDM6Q9NQX0 595 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 MPV17LQ2QL34 196 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 FA2HQ7L5A8 372 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 MYPOPQ86VE0 399 aaPredicted RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 ZNF385AQ96PM9 386 aaKnown RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 SLC25A10Q9UBX3 287 aaPredicted RBP17.71■□□□□ 0.43
CTDP1-208ENST00000613122 ANXA10Q9UJ72 324 aa17.71■□□□□ 0.43
CTDP1-208ENST00000613122 IL13RA2Q14627 380 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 CCDC144NLQ6NUI1 221 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 P2RY6Q15077 328 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 DOLPP1Q86YN1 238 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 MARF1Q9Y4F3 1742 aaKnown RBP17.7■□□□□ 0.42
CTDP1-208ENST00000613122 FAM24AA6NFZ4 105 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 C1QAP02745 245 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 FLYWCH2Q96CP2 140 aaKnown RBP17.7■□□□□ 0.42
CTDP1-208ENST00000613122 OGG1O15527 345 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 OR2J1Q9GZK6 312 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 A0A0J9YW62 118 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 PRR33A8MZF0 331 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 ATP6V1G2-DDX39BF2Z307 99 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 NTN1O95631 604 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 ZNF528Q3MIS6 628 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 TSPO2Q5TGU0 170 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 DYNLRB2Q8TF09 96 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 RNF2Q99496 336 aa17.7■□□□□ 0.42
CTDP1-208ENST00000613122 CTSDP07339 412 aaPredicted RBP17.69■□□□□ 0.42
CTDP1-208ENST00000613122 LINC00596Q86U02 117 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 KCNK15Q9H427 330 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 FCARP24071 287 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 RAB32Q13637 225 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 GGTLC2Q14390 218 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 RNF133Q8WVZ7 376 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 PIPOXQ9P0Z9 390 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 CDC34P49427 236 aaPredicted RBP17.69■□□□□ 0.42
CTDP1-208ENST00000613122 GABRA6Q16445 453 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 RP1L1Q8IWN7 2480 aaPredicted RBP17.69■□□□□ 0.42
CTDP1-208ENST00000613122 ANGPTL4Q9BY76 406 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 FFAR1O14842 300 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 B3GALNT1O75752 331 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 SLC23A3Q6PIS1 610 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 OR2C3Q8N628 320 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 RSRP1Q9BUV0 290 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 RHOFQ9HBH0 211 aa17.69■□□□□ 0.42
CTDP1-208ENST00000613122 TRIM77I1YAP6 450 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 GAMTQ14353 236 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 WDFY2Q96P53 400 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 COL4A5P29400 1685 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 GNG4P50150 75 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 C4orf17Q53FE4 359 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 MAP1LC3B2A6NCE7 125 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 SOCS1O15524 211 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 ADRA2AP08913 450 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 ATP5SQ99766 215 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 MAP1LC3BQ9GZQ8 125 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 CCL27Q9Y4X3 112 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 AMTP48728 403 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 DNASE2BQ8WZ79 361 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 LIPGQ9Y5X9 500 aa17.68■□□□□ 0.42
CTDP1-208ENST00000613122 NPIPB8E9PQR5 432 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 NAAAQ02083 359 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 MIDNQ504T8 468 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 XAF1Q6GPH4 301 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 COMMD1Q8N668 190 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 OR10A7Q8NGE5 316 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 NGFRP08138 427 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 CCL8P80075 99 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 HARBI1Q96MB7 349 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 SLIRPQ9GZT3 109 aaKnown RBP17.67■□□□□ 0.42
CTDP1-208ENST00000613122 UPK3AO75631 287 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 CD200P41217 278 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 HLA-DRB3P79483 266 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 ZNF429Q86V71 674 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 ADAMTS17Q8TE56 1095 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 ACP1P24666 158 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 C11orf42Q8N5U0 333 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 OR10G4Q8NGN3 311 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 OR10G9Q8NGN4 311 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 OR10G7Q8NGN6 311 aa17.67■□□□□ 0.42
CTDP1-208ENST00000613122 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms