RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GGACTQ9BVM4 153 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 PRO1933Q9H354 126 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 GLRX2Q9NS18 164 aa17.65■□□□□ 0.42
SSBP3-216ENST00000610401 PPYP01298 95 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 S100A8P05109 93 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 SEC11BP0C7V7 166 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 DLK1P80370 383 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 SURF2Q15527 256 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-216ENST00000610401 CEACAM16Q2WEN9 425 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 TM2D1Q9BX74 207 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 RNF122Q9H9V4 155 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 RBFOX3A6NFN3 312 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 MSX1P28360 303 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 RAB2AP61019 212 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 MPV17LQ2QL34 196 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF611Q8N823 705 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 SYT3Q9BQG1 590 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 CRIM1Q9NZV1 1036 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 HDGFL3Q9Y3E1 203 aa17.64■□□□□ 0.41
SSBP3-216ENST00000610401 TP53I11O14683 189 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 RAB11AP62491 216 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 HIST3H3Q16695 136 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 SLC16A14Q7RTX9 510 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 TMEM50AO95807 157 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 TRGC2P03986 189 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 THNSL2Q86YJ6 484 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ZIC4Q8N9L1 334 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 Q8WTZ3 238 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ABHD3Q8WU67 409 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 HPSE2Q8WWQ2 592 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 TOLLIPQ9H0E2 274 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 CCL28Q9NRJ3 127 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 IGKV1D-13A0A0B4J2D9 117 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 CHST1O43916 411 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 IGKV1-13P0DP09 117 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 IAPPP10997 89 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 CCL4P13236 92 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 GPM6AP51674 278 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ERVFRD-1P60508 538 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF818PQ6ZRF7 136 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF429Q86V71 674 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 NECAP1Q8NC96 275 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 RDH5Q92781 318 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF845Q96IR2 970 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-216ENST00000610401 GPR61Q9BZJ8 451 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 DOK5Q9P104 306 aa17.63■□□□□ 0.41
SSBP3-216ENST00000610401 IGHV5-10-1A0A0J9YXX1 117 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 A0A0U1RQV5 110 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 MPPED1O15442 326 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 IFNA17P01571 189 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 EDN3P14138 238 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 MMP9P14780 707 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 TCN2P20062 427 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 HAAOP46952 286 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 LSM6P62312 80 aaKnown RBP17.62■□□□□ 0.41
SSBP3-216ENST00000610401 RPL23AP62750 156 aaKnown RBP17.62■□□□□ 0.41
SSBP3-216ENST00000610401 S100PBPQ96BU1 408 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 BOD1Q96IK1 185 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 RSG1Q9BU20 258 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 TMPRSS5Q9H3S3 457 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 CNOT4O95628 575 aaKnown RBP17.62■□□□□ 0.41
SSBP3-216ENST00000610401 PSG4Q00888 419 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 PYY3Q5JQD4 70 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 OR1F12Q8NHA8 337 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 GINS3Q9BRX5 216 aa17.62■□□□□ 0.41
SSBP3-216ENST00000610401 LAMA5O15230 3695 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 ZIC3O60481 467 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 RFPL3SP0C7P2 107 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 TUBG1P23258 451 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 WIPI1Q5MNZ9 446 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF383Q8NA42 475 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 OR5T1Q8NG75 326 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 OR1K1Q8NGR3 316 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 CPNE4Q96A23 557 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-216ENST00000610401 COL4A2P08572 1712 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 PROB1E7EW31 1015 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 OR2B11Q5JQS5 317 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 LINC00469Q8N7U9 141 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 BCO1Q9HAY6 547 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 HS3ST3B1Q9Y662 390 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 S100A2P29034 98 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 AAED1Q7RTV5 226 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 TMEM252Q8N6L7 170 aa17.61■□□□□ 0.41
SSBP3-216ENST00000610401 METTL1Q9UBP6 276 aaKnown RBP17.61■□□□□ 0.41
SSBP3-216ENST00000610401 ICE1Q9Y2F5 2266 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 BCL3P20749 454 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 S100PP25815 95 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 S100A12P80511 92 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 AKR1C8PQ5T2L2 129 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF880Q6PDB4 577 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 EXTL1Q92935 676 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 C18orf12Q96KH6 178 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 ZNF576Q9H609 170 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 FOLR2P14207 255 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 MRPS34P82930 218 aaKnown RBP17.6■□□□□ 0.41
SSBP3-216ENST00000610401 RABEPKQ7Z6M1 372 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 CMTM1Q8IZ96 169 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 OR51M1Q9H341 326 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 TINAGQ9UJW2 476 aa17.6■□□□□ 0.41
SSBP3-216ENST00000610401 RBM7Q9Y580 266 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms