RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 APELAP0DMC3 54 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 METAP1P53582 386 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 IGHV5-51A0A0C4DH38 117 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 TRDCB7Z8K6 153 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 C2CD4DB7Z1M9 353 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 ORM1P02763 201 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 TCTAP57738 103 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 TMEM196Q5HYL7 178 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 FAM109BQ6ICB4 259 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 PDCD6O75340 191 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 HLA-GP17693 338 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 C21orf58P58505 322 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 CD300CQ08708 224 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 ZNF383Q8NA42 475 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 OR8B12Q8NGG6 310 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 LRRC29Q8WV35 223 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 GEMIN2O14893 280 aaKnown RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 WNT3P56703 355 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 BSXQ3C1V8 233 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 PDCD11Q14690 1871 aaKnown RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 METTL12A8MUP2 240 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 RAG2P55895 527 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 HERVK_113P61574 105 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
USP6NL-205ENST00000609104 OR4P4Q8NGL7 312 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 LINC01387J3KSC0 135 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 HLA-BQ31612 363 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 MYOZ3Q8TDC0 251 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 ARAP2Q8WZ64 1704 aa11.59□□□□□ -0.55
USP6NL-205ENST00000609104 CXCL3P19876 107 aa11.58□□□□□ -0.55
USP6NL-205ENST00000609104 LGALS7P47929 136 aa11.58□□□□□ -0.55
USP6NL-205ENST00000609104 ANKRD37Q7Z713 158 aa11.58□□□□□ -0.55
USP6NL-205ENST00000609104 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.55
USP6NL-205ENST00000609104 SFTPA1Q8IWL2 248 aa11.58□□□□□ -0.55
USP6NL-205ENST00000609104 RPLP1P05386 114 aaKnown RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 FOXC1Q12948 553 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 JMJD6Q6NYC1 403 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 COA4Q9NYJ1 87 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 HSF4Q9ULV5 492 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 TDHQ8IZJ6 230 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 OR5AU1Q8NGC0 362 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 CA5BP1Q8WTZ4 195 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 OR6C3Q9NZP0 311 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 DNPH1O43598 174 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 ADAD2Q8NCV1 583 aaKnown RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 VN1R17PQ8TDU5 208 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 CXXC4Q9H2H0 198 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 SOCS1O15524 211 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 P01737 135 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 PPP1CAP62136 330 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 DOLPP1Q86YN1 238 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 OR2A5Q96R48 311 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 VAX2Q9UIW0 290 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 PCDHGA9Q9Y5G4 932 aaKnown RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 PRR35P0CG20 571 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 LYPD8Q6UX82 237 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 KLF3P57682 345 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 LANCL1O43813 399 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 IGF2P01344 180 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 NKX2-2O95096 273 aa11.58□□□□□ -0.56
USP6NL-205ENST00000609104 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-205ENST00000609104 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 IL24Q13007 206 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 ATG101Q9BSB4 218 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 TMEM191AQ9H0A3 160 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 SSMEM1Q8WWF3 244 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 PCOLCE2Q9UKZ9 415 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 MBPP02686 304 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-205ENST00000609104 PCMT1P22061 227 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 RGP1Q92546 391 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-205ENST00000609104 COL8A1P27658 744 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 LILRA5A6NI73 299 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 RIGQ13278 110 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 MOGAT1Q96PD6 335 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 GPR27Q9NS67 375 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-205ENST00000609104 SRP14P37108 136 aaKnown RBP11.57□□□□□ -0.56
USP6NL-205ENST00000609104 CBLN2Q8IUK8 224 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 STARD4Q96DR4 205 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 AMDHD2Q9Y303 409 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 ZNF205O95201 554 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 STAG3L2P0CL84 134 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 STARD10Q9Y365 291 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 APCSP02743 223 aa11.57□□□□□ -0.56
USP6NL-205ENST00000609104 ASB10Q8WXI3 467 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms