RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 KCNK7Q9Y2U2 307 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 UBE2QL1A1L167 161 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 NKX6-3A6NJ46 265 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 SERPINE3A8MV23 424 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 MCRIP1C9JLW8 97 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 J3QRK9 145 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 PSPNO60542 156 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 GSTP1P09211 210 aaKnown RBP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 PAX1P15863 534 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 LMO1P25800 156 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 KCNJ8Q15842 424 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 RNASE12Q5GAN4 147 aaKnown RBP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 AVPI1Q5T686 147 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 HACD4Q5VWC8 232 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 Q8N402 240 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 BPIFB2Q8N4F0 458 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 ASCC1Q8N9N2 400 aaKnown RBP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 NEK7Q8TDX7 302 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 DYRK2Q92630 601 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 RAB1CQ92928 201 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 FAAP24Q9BTP7 215 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 PPA2Q9H2U2 334 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 BARX1Q9HBU1 254 aaPredicted RBP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 TMEM165Q9HC07 324 aa9.31□□□□□ -0.92
CTCFL-214ENST00000608108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTCFL-214ENST00000608108 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 FLNBO75369 2602 aaKnown RBP9.3□□□□□ -0.92
CTCFL-214ENST00000608108 TMEM82A0PJX8 343 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 MEIOCA2RUB1 952 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 TMPRSS2O15393 492 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 FSTL3O95633 263 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 IGHV2-70P01814 119 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 DNASE1P24855 282 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 CD40LGP29965 261 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 PRSS3P35030 304 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 PPP5CP53041 499 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 TMEM33P57088 247 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 GNG2P59768 71 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 DGCR2P98153 550 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ARFRP1Q13795 201 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 RBM39Q14498 530 aaKnown RBP9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ATXN7L3Q14CW9 347 aaPredicted RBP9.3□□□□□ -0.92
CTCFL-214ENST00000608108 PNLIPRP3Q17RR3 467 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ZNF788Q6ZQV5 615 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 MUC20Q8N307 709 aaPredicted RBP9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ZNF561Q8N587 486 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 FAM216BQ8N7L0 139 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 GDPD1Q8N9F7 314 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ZNRF1Q8ND25 227 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 SMIM4Q8WVI0 70 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 NUDCD2Q8WVJ2 157 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 SDSLQ96GA7 329 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 GAFA1Q96PS6 74 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 CCL13Q99616 98 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 CHST6Q9GZX3 395 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 ZNF665Q9H7R5 613 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 SEBOXQ9HB31 216 aaPredicted RBP9.3□□□□□ -0.92
CTCFL-214ENST00000608108 AK3Q9UIJ7 227 aa9.3□□□□□ -0.92
CTCFL-214ENST00000608108 NOTCH2Q04721 2471 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 A0A1B0GW55 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 CTDSPLO15194 276 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 ZNF737O75373 536 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 GLAP06280 429 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 LPLP06858 475 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MELTFP08582 738 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L2P0CJ85 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L3P0CJ86 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L4P0CJ87 422 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L5P0CJ88 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L6P0CJ89 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L7P0CJ90 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 AMY2BP19961 511 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 GPR6P46095 362 aaPredicted RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 PDLIM4P50479 330 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 IL13RA1P78552 427 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MRPS15P82914 257 aaKnown RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 ATPAF1Q5TC12 328 aaPredicted RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 C17orf107Q6ZR85 190 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 TMEM185AQ8NFB2 350 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 SDHCQ99643 169 aaPredicted RBP9.29□□□□□ -0.92
CTCFL-214ENST00000608108 TMEM246Q9BRR3 403 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 SCPEP1Q9HB40 452 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 ETAA1Q9NY74 926 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 DUX4Q9UBX2 424 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MAB21L2Q9Y586 359 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MALRD1Q5VYJ5 2156 aa9.29□□□□□ -0.92
CTCFL-214ENST00000608108 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 GABARAPH6UMI1 98 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 SIGLEC5O15389 551 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 ADAM20O43506 726 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 NDUFA2O43678 99 aa9.28□□□□□ -0.92
CTCFL-214ENST00000608108 GSTZ1O43708 216 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms