RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 IGKV1D-12P01611 117 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 HLA-AP01891 365 aaKnown RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 CDK1P06493 297 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 SOD3P08294 240 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 GTF2F2P13984 249 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 PTNP21246 168 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 TSPOP30536 169 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 LCN1P31025 176 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 EVI2BP34910 448 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 HTR2BP41595 481 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 RAB38P57729 211 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 BAXQ07812 192 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 BIKQ13323 160 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 PCOTHQ58A44 107 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 IDNKQ5T6J7 187 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 ELP2Q6IA86 826 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 Q6ZQT7 251 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 USP50Q70EL3 339 aaPredicted RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 OR51Q1Q8NH59 317 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 C2orf15Q8WU43 125 aaKnown RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 C22orf15Q8WYQ4 148 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 OR5P3Q8WZ94 311 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 CDKL2Q92772 493 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 APOBEC3DQ96AK3 386 aaPredicted RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 TMIGD2Q96BF3 282 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 SLC25A44Q96H78 314 aaPredicted RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 C20orf166-AS1Q96NR2 134 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 YPEL4Q96NS1 127 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 OLFM3Q96PB7 478 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 LZTFL1Q9NQ48 299 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 SDHAF3Q9NRP4 125 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 SDHAF2Q9NX18 166 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 MAT2BQ9NZL9 334 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 VAPAQ9P0L0 249 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 IFNKQ9P0W0 207 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 ZNF337Q9Y3M9 751 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 LINC00588Q9Y4M8 146 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 TBL2Q9Y4P3 447 aaKnown RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 FADS3Q9Y5Q0 445 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 NRCAMQ92823 1304 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 MYO15BQ96JP2 1530 aa0.58□□□□□ -2.32
SNORA28-201ENST00000606769 COL5A3P25940 1745 aaPredicted RBP0.58□□□□□ -2.32
SNORA28-201ENST00000606769 POLR3AO14802 1390 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ADAMTS7Q9UKP4 1686 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 IGHV1-45A0A0A0MS14 117 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 TRAV8-3A0A0A6YYJ7 113 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 IGHV2-26A0A0B4J1V2 119 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 PGPA6NDG6 321 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 MGAT4DA6NG13 374 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 PCNX2A6NKB5 2137 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 C17orf51A8MQB3 221 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ZNF878C9JN71 531 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 D6RAR5 112 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 TMEM250H0YL14 139 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 J3QRE1 110 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 hCG_2039718K7EN88 272 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 UPK2O00526 184 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 POLR3GO15318 223 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 TCF21O43680 179 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ENSAO43768 121 aaKnown RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 PDCD6O75340 191 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CDS2O95674 445 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OPN1SWP03999 348 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CTSGP08311 255 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CCL2P13500 99 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 GZMMP51124 257 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 XKP51811 444 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 AQP5P55064 265 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OR10A3P58181 314 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ZBTB6Q15916 424 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ZNF181Q2M3W8 571 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 RESP18Q5W5W9 173 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 PAGE2Q7Z2X7 111 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 HS3ST5Q8IZT8 346 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 GATD1Q8NB37 220 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 DRAXINQ8NBI3 349 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OR11G2Q8NGC1 345 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OR6K3Q8NGY3 331 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OR4A5Q8NH83 315 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 SUN5Q8TC36 379 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 LMX1AQ8TE12 382 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ZNF75CPQ92670 426 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CIDECQ96AQ7 238 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 PYURFQ96I23 114 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 OR2M4Q96R27 311 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 VAT1Q99536 393 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 SUCNR1Q9BXA5 334 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 TSGA10Q9BZW7 698 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 RAB1BQ9H0U4 201 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ALX4Q9H161 411 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ABCG5Q9H222 651 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 MMACHCQ9Y4U1 282 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 TRAPPC1Q9Y5R8 145 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 BZW2Q9Y6E2 419 aaKnown RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ZNF780BQ9Y6R6 833 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CACNA1GO43497 2377 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ADAMTSL1Q8N6G6 1762 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 COL11A1P12107 1806 aaPredicted RBP0.57□□□□□ -2.32
SNORA28-201ENST00000606769 ITGB4P16144 1822 aa0.57□□□□□ -2.32
SNORA28-201ENST00000606769 CRB1P82279 1406 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms