RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 ZAR1LA6NP61 321 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 NUDT19A8MXV4 375 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 ATF1P18846 271 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 CALB2P22676 271 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 MYCNOSP40205 109 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 LUMP51884 338 aaPredicted RBP13.27□□□□□ -0.29
CCDC12-210ENST00000604181 ATP1B3P54709 279 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 MTCP1P56278 107 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 DGCR2P98153 550 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 PDZK1IP1Q13113 114 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 KPNB1Q14974 876 aaKnown RBP13.27□□□□□ -0.29
CCDC12-210ENST00000604181 DNAAF1Q8NEP3 725 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 LEAP2Q969E1 77 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 RAX2Q96IS3 184 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 PRR25Q96S07 402 aa13.27□□□□□ -0.29
CCDC12-210ENST00000604181 H2AFY2Q9P0M6 372 aaPredicted RBP13.27□□□□□ -0.29
CCDC12-210ENST00000604181 M0QZK8 103 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 TOR1AO14656 332 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 SH2D1BO14796 132 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 CGB3P0DN86 165 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 CGB7P0DN87 165 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 NFYBP25208 207 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 LMO1P25800 156 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 CEACAM3P40198 252 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 PTGFRP43088 359 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 CDC42P60953 191 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 ISL1P61371 349 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 SCN1BQ07699 218 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 ATXN7L3Q14CW9 347 aaPredicted RBP13.26□□□□□ -0.29
CCDC12-210ENST00000604181 DEFB136Q30KP8 78 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 LCNL1Q6ZST4 164 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 SPATA24Q86W54 205 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 DRAM1Q8N682 238 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 OR5D18Q8NGL1 313 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 DNAJC9Q8WXX5 260 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 PP6455Q8WZ26 134 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 KIRREL1Q96J84 757 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 ASCL2Q99929 193 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 MCRIP2Q9BUT9 160 aaKnown RBP13.26□□□□□ -0.29
CCDC12-210ENST00000604181 COMMD4Q9H0A8 199 aa13.26□□□□□ -0.29
CCDC12-210ENST00000604181 STARD9Q9P2P6 4700 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 TCRBV3S1A0A5B6 114 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 SLC33A1O00400 549 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-210ENST00000604181 SERPINA3P01011 423 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
CCDC12-210ENST00000604181 MNDAP41218 407 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 ZNF85Q03923 595 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 HNF4GQ14541 408 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 TP53I3Q53FA7 332 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 KRBOX4Q5JUW0 171 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 THNSL2Q86YJ6 484 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 OR4D6Q8NGJ1 314 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 CHPT1Q8WUD6 406 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 TOMM40LQ969M1 308 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
CCDC12-210ENST00000604181 FGGYQ96C11 551 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 ADI1Q9BV57 179 aa13.25□□□□□ -0.29
CCDC12-210ENST00000604181 BIRC6Q9NR09 4857 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 SERPINE3A8MV23 424 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 OOSP1A8MZH6 123 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 KDM4BO94953 1096 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CYB5AP00167 134 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CSN2P05814 226 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 OR2T7P0C7T2 308 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 ZNF44P15621 663 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 PRRX1P54821 245 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CDK5R1Q15078 307 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CCDC144NLQ6NUI1 221 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 UTS2BQ765I0 119 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 GID4Q8IVV7 300 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 OR13A1Q8NGR1 328 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 RPEQ96AT9 228 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CREB3L1Q96BA8 519 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 C10orf35Q96D05 121 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
CCDC12-210ENST00000604181 ZFP57Q9NU63 452 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 GLS2Q9UI32 602 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 CSMD3Q7Z407 3707 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 SORL1Q92673 2214 aa13.24□□□□□ -0.29
CCDC12-210ENST00000604181 KBTBD11-OT1A0A1B0GTJ5 212 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 ZNF729A6NN14 1252 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-210ENST00000604181 J3QR06 171 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 CCL24O00175 119 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 SULT1C4O75897 302 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 IGHG2P01859 326 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 RPLP1P05386 114 aaKnown RBP13.23□□□□□ -0.29
CCDC12-210ENST00000604181 UBCP0CG48 685 aaKnown RBP13.23□□□□□ -0.29
CCDC12-210ENST00000604181 TMEM11P17152 192 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 HTR1FP30939 366 aa13.23□□□□□ -0.29
CCDC12-210ENST00000604181 POLR2IP36954 125 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms