RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ODAMA1E959 279 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 IGHV3-7P01780 117 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 ERP29P30040 261 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 PTGFRP43088 359 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 ARHGDIBP52566 201 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 LPCAT4Q643R3 524 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 C10orf99Q6UWK7 81 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 KCTD20Q7Z5Y7 419 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 LHFPL3Q86UP9 236 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 OR4D6Q8NGJ1 314 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 C4orf36Q96KX1 117 aa14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 SEBOXQ9HB31 216 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-223ENST00000600552 KDM4BO94953 1096 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 PRRX1P54821 245 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 CD83Q01151 205 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 BDH1Q02338 343 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 LTC4SQ16873 150 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 UTF1Q5T230 341 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 HEPN1Q6WQI6 88 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 RTN4RL2Q86UN3 420 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 SATL1Q86VE3 508 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 ACBD7Q8N6N7 88 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 MBOAT4Q96T53 435 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 PPIL3Q9H2H8 161 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 ZCCHC4Q9H5U6 513 aa14.05□□□□□ -0.16
SHKBP1-223ENST00000600552 ISG15P05161 165 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 CEACAM3P40198 252 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 GLP1RP43220 463 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 ALKBH1Q13686 389 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 TCTEX1D4Q5JR98 221 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 TPTE2P1Q5T6R2 138 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 TRUB1Q8WWH5 349 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 LEAP2Q969E1 77 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 MYDGFQ969H8 173 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 PELI1Q96FA3 418 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 COQ2Q96H96 371 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 LIN7BQ9HAP6 207 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 TAS2R3Q9NYW6 316 aa14.04□□□□□ -0.16
SHKBP1-223ENST00000600552 OR4C45A6NMZ5 311 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 BUB1B-PAK6H3BSN5 160 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 SLC33A1O00400 549 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 EI24O14681 340 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 ATP5HO75947 161 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 DEFB121Q5J5C9 76 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 Q6P435 159 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 FDX2Q6P4F2 183 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 C16orf82Q7Z2V1 217 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 TSEN15Q8WW01 171 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 CORO2AQ92828 525 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 RBM14Q96PK6 669 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 ALG8Q9BVK2 526 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 COMMD4Q9H0A8 199 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 ISG20L2Q9H9L3 353 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 MYRFQ9Y2G1 1151 aa14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 TSSC4Q9Y5U2 329 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-223ENST00000600552 J3QRE1 110 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 OR2F2O95006 317 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 IGLV1-47P01700 117 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 MNDAP41218 407 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 CCR9P51686 369 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 SNRPGP62308 76 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 HES1Q14469 280 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 HLA-DRB5Q30154 266 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 PAN3Q58A45 887 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 MEDAGQ5VYS4 303 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 RPEQ96AT9 228 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 MRPL48Q96GC5 212 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 GPER1Q99527 375 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 GMPPBQ9Y5P6 360 aa14.02□□□□□ -0.17
SHKBP1-223ENST00000600552 MEIKINA0A087WXM9 373 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 TRAV39A0A0B4J263 110 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 SNTNA6NMZ2 147 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 H0YJX3 145 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 LMO1P25800 156 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 HNF4GQ14541 408 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 KISS1Q15726 138 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 C17orf58Q2M2W7 97 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 ZNF691Q5VV52 312 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 OR5D14Q8NGL3 314 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 OR10K1Q8NGX5 313 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 RFESDQ8TAC1 157 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 TOMM40LQ969M1 308 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 ZNF649Q9BS31 505 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 FAM192AQ9GZU8 254 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 KIF25Q9UIL4 384 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 DHDHQ9UQ10 334 aa14.01□□□□□ -0.17
SHKBP1-223ENST00000600552 ZNF729A6NN14 1252 aaPredicted RBP14□□□□□ -0.17
SHKBP1-223ENST00000600552 E9PI62 339 aa14□□□□□ -0.17
SHKBP1-223ENST00000600552 MT-ND2P03891 347 aa14□□□□□ -0.17
SHKBP1-223ENST00000600552 ALPLP05186 524 aa14□□□□□ -0.17
SHKBP1-223ENST00000600552 FAM106CPP0CH98 169 aa14□□□□□ -0.17
SHKBP1-223ENST00000600552 SOX2P48431 317 aa14□□□□□ -0.17
SHKBP1-223ENST00000600552 GNG10P50151 68 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms