RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 COQ2Q96H96 371 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 S100A13Q99584 98 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
VRK3-219ENST00000600137 A0A0A6YYD4 124 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 IFITM5A6NNB3 132 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 MGST3O14880 152 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 CSTBP04080 98 aaKnown RBP11.29□□□□□ -0.6
VRK3-219ENST00000600137 CSN2P05814 226 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 UBBP0CG47 229 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 CGB3P0DN86 165 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 CGB7P0DN87 165 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 ZNF44P15621 663 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 RAB3BP20337 219 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 ERP29P30040 261 aaKnown RBP11.29□□□□□ -0.6
VRK3-219ENST00000600137 SDC2P34741 201 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 PSMD7P51665 324 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 CLDN12P56749 244 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 ZNF273Q14593 569 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 P2RY14Q15391 338 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 GRK1Q15835 563 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 BTNL3Q6UXE8 466 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 OR51D1Q8NGF3 324 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 WDFY2Q96P53 400 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 BEX2Q9BXY8 128 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 MRPS26Q9BYN8 205 aaKnown RBP11.29□□□□□ -0.6
VRK3-219ENST00000600137 PPA2Q9H2U2 334 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 VCX3AQ9NNX9 186 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
VRK3-219ENST00000600137 FBLN5Q9UBX5 448 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 LPAR3Q9UBY5 353 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 GLS2Q9UI32 602 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
VRK3-219ENST00000600137 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 LOC100506127A0A0U1RQW1 187 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 FOXI3A8MTJ6 420 aaPredicted RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 PDCD5O14737 125 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 BPNT1O95861 308 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 GABRR1P24046 479 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 GLIPR1P48060 266 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 DLX1P56177 255 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 RPL31P62899 125 aaKnown RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 PAX5Q02548 391 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 AESQ08117 197 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 CHRFAM7AQ494W8 412 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 HES5Q5TA89 166 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 SLC16A12Q6ZSM3 486 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 LINC00596Q86U02 117 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 TPRA1Q86W33 373 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 BPIFB2Q8N4F0 458 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 CORO2AQ92828 525 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 FAM46BQ96A09 425 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 FAM3DQ96BQ1 224 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 POM121Q96HA1 1249 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 NAA50Q9GZZ1 169 aaKnown RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
VRK3-219ENST00000600137 UNKLQ9H9P5 680 aaKnown RBP11.28□□□□□ -0.6
VRK3-219ENST00000600137 A0A0B4J203 849 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 MEX3AA1L020 520 aaKnown RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 SMIM30A4D0T7 59 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 AIREO43918 545 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 CRTAPO75718 401 aaPredicted RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
VRK3-219ENST00000600137 MPIG6BO95866 241 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 FAM157CP0CG43 387 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 CCL3L1P16619 93 aa11.27□□□□□ -0.61
VRK3-219ENST00000600137 MYL9P24844 172 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms