RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 hADV38S2A0JD32 116 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 TMEM89A2RUT3 159 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 DNAJC9-AS1A6NH13 148 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A8PA6NJQ4 464 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 DEGS1O15121 323 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 NPFFO15130 113 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 CALCBP10092 127 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 MAP2K4P45985 399 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 GPR176Q14439 515 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 GRK1Q15835 563 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 CD200R1LQ6Q8B3 271 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 RBMS3Q6XE24 437 aaKnown RBP14.39□□□□□ -0.11
USHBP1-209ENST00000598570 LINC00596Q86U02 117 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 FAM185AQ8N0U4 392 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 OR11H6Q8NGC7 330 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 UFD1Q92890 307 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 COQ2Q96H96 371 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 GPER1Q99527 375 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 HEXA-AS1Q9H8Q6 139 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 SIRT7Q9NRC8 400 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 PCDHB16Q9NRJ7 776 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 POMT1Q9Y6A1 747 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 KIAA2026Q5HYC2 2103 aa14.39□□□□□ -0.11
USHBP1-209ENST00000598570 ANK2Q01484 3957 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 hCG_1809904A0A1W2PP81 198 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1W2PPE2 198 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1W2PR64 198 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1W2PRV1 198 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 CDRT1O95170 752 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 CCL3L1P16619 93 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 SRMP19623 302 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 GALP22466 123 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 GABRR1P24046 479 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 KCNJ3P48549 501 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 DLX1P56177 255 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 RBM11P57052 281 aaKnown RBP14.38□□□□□ -0.11
USHBP1-209ENST00000598570 RSU1Q15404 277 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 FAM27D1Q5T7N8 215 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 UBE2UQ5VVX9 321 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 LIPKQ5VXJ0 399 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 ZNF367Q7RTV3 350 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 OSR2Q8N2R0 312 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.38□□□□□ -0.11
USHBP1-209ENST00000598570 MEGF9Q9H1U4 602 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 TAS2R3Q9NYW6 316 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 GHRLQ9UBU3 117 aa14.38□□□□□ -0.11
USHBP1-209ENST00000598570 A0A0U1RQK1 487 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 FUOMA2VDF0 154 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 MELTFP08582 738 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 GABRA5P31644 462 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 IER3P46695 156 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 BAMBIQ13145 260 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 SSX1Q16384 188 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 AANATQ16613 207 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 MPV17LQ2QL34 196 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 CEACAM19Q7Z692 300 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 SPARTQ8N0X7 666 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 OR4D6Q8NGJ1 314 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 FOXRED1Q96CU9 486 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-209ENST00000598570 TMED9Q9BVK6 235 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 CHST6Q9GZX3 395 aa14.37□□□□□ -0.11
USHBP1-209ENST00000598570 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
USHBP1-209ENST00000598570 MDFIC2A0A1B0GVS7 189 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A10PA6NDY2 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A18PA6NE21 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A16PA6NEW6 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A20PA6NIJ5 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A7PA6NKC0 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A22PA8MWA6 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A12PA8MX19 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A5PA8MXJ8 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A23PA8MXZ1 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 ODF3BA8MYP8 253 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 SIRPB1O00241 398 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A15PP0C7V4 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A13PP0C7W8 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A14PP0C7W9 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 FAM90A24PP0C7X0 464 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 IGHV1-8P0DP01 117 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 GTF2F2P13984 249 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 ERVFRD-1P60508 538 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 PIGYQ3MUY2 71 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 GAPTQ8N292 157 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 OR10K1Q8NGX5 313 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 ZNF714Q96N38 554 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 NKX3-1Q99801 234 aaPredicted RBP14.36□□□□□ -0.11
USHBP1-209ENST00000598570 ING4Q9UNL4 249 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
USHBP1-209ENST00000598570 A0A087X0M5 115 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 A0A1B0GX30 115 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 ODAMA1E959 279 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 RGS9O75916 674 aaPredicted RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 HTR3BO95264 441 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 MAS1P04201 325 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 GLAP06280 429 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 ZNF44P15621 663 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 EEF1B2P24534 225 aaKnown RBP14.35□□□□□ -0.11
USHBP1-209ENST00000598570 SAA4P35542 130 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 GLIPR1P48060 266 aa14.35□□□□□ -0.11
USHBP1-209ENST00000598570 EDDM3BP56851 147 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms