RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 TMEM104Q8NE00 496 aa16.75■□□□□ 0.27
PNKP-211ENST00000598020 NANPQ8TBE9 248 aa16.75■□□□□ 0.27
PNKP-211ENST00000598020 KCTD7Q96MP8 289 aa16.75■□□□□ 0.27
PNKP-211ENST00000598020 CHCHD6Q9BRQ6 235 aa16.75■□□□□ 0.27
PNKP-211ENST00000598020 SIRPDQ9H106 197 aa16.75■□□□□ 0.27
PNKP-211ENST00000598020 NIPBLQ6KC79 2804 aaeCLIP16.75■□□□□ 0.27
PNKP-211ENST00000598020 GEMIN2O14893 280 aaKnown RBP16.74■□□□□ 0.27
PNKP-211ENST00000598020 FAM157CP0CG43 387 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 VSIG8P0DPA2 414 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 MGMTP16455 207 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 RAB3BP20337 219 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 ARF6P62330 175 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 QRFPP83859 136 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 PAX5Q02548 391 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 SCN1BQ07699 218 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 METTL11BQ5VVY1 283 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 IL17RELQ6ZVW7 336 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 CMTM4Q8IZR5 234 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 OR13F1Q8NGS4 319 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 KCNG3Q8TAE7 436 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 WDFY2Q96P53 400 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 PLGRKTQ9HBL7 147 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 FBLN5Q9UBX5 448 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 SVEP1Q4LDE5 3571 aa16.74■□□□□ 0.27
PNKP-211ENST00000598020 A0A1W2PQ09 198 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 TMEM14DPA8MWL7 114 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 M0R1W7 72 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 CRTAPO75718 401 aaPredicted RBP16.73■□□□□ 0.27
PNKP-211ENST00000598020 HOXB4P17483 251 aaPredicted RBP16.73■□□□□ 0.27
PNKP-211ENST00000598020 SRD5A1P18405 259 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
PNKP-211ENST00000598020 KCNJ3P48549 501 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 PDCD1Q15116 288 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 RAB11BQ15907 218 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 TMEM200BQ69YZ2 307 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 OR2W3Q7Z3T1 314 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 OR4M1Q8NGD0 313 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 Q96M66 194 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 CHST6Q9GZX3 395 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 NCOR1P1Q9H4R4 102 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 BANF2Q9H503 90 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 SPACA1Q9HBV2 294 aa16.73■□□□□ 0.27
PNKP-211ENST00000598020 C2CD3Q4AC94 2353 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 LOC100506127A0A0U1RQW1 187 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 A0A1W2PPH5 198 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 FUOMA2VDF0 154 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 IFITM5A6NNB3 132 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 H3BUI4 141 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 OR7C1O76099 320 aaPredicted RBP16.72■□□□□ 0.27
PNKP-211ENST00000598020 TOX4O94842 621 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 P2RX3P56373 397 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 TAF9Q16594 264 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 KLF17Q5JT82 389 aaPredicted RBP16.72■□□□□ 0.27
PNKP-211ENST00000598020 FAM185AQ8N0U4 392 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 TBX15Q96SF7 602 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 CENPOQ9BU64 300 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 SELENOIQ9C0D9 397 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 PPA2Q9H2U2 334 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 UNKLQ9H9P5 680 aaKnown RBP16.72■□□□□ 0.27
PNKP-211ENST00000598020 RCC2Q9P258 522 aaKnown RBP16.72■□□□□ 0.27
PNKP-211ENST00000598020 STEAP1Q9UHE8 339 aa16.72■□□□□ 0.27
PNKP-211ENST00000598020 ZFHX3Q15911 3703 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 hADV38S2A0JD32 116 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 AIPO00170 330 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 AIREO43918 545 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 ARSBP15848 533 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 ALDH3B2P48448 385 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 EDDM3BP56851 147 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 OR10A3P58181 314 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 UNC119Q13432 240 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 PAN3Q58A45 887 aaKnown RBP16.71■□□□□ 0.27
PNKP-211ENST00000598020 NR2C2APQ86WQ0 139 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 Q8N7P7 452 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 SUMF2Q8NBJ7 301 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 FAM3DQ96BQ1 224 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 DPCDQ9BVM2 203 aaPredicted RBP16.71■□□□□ 0.27
PNKP-211ENST00000598020 TM2D1Q9BX74 207 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 ZNF581Q9P0T4 197 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 ONECUT1Q9UBC0 465 aa16.71■□□□□ 0.27
PNKP-211ENST00000598020 NOTOA8MTQ0 251 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 LDLRAD4O15165 306 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 MPIG6BO95866 241 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 TFAP2AP05549 437 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 GLAP06280 429 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 SDC2P34741 201 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 DLX6P56179 175 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 RPS27AP62979 156 aaKnown RBP16.7■□□□□ 0.26
PNKP-211ENST00000598020 SCGB2A2Q13296 93 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 BLMHQ13867 455 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 EDDM3AQ14507 147 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 P2RY14Q15391 338 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 OR10K2Q6IF99 312 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 METAP1DQ6UB28 335 aaPredicted RBP16.7■□□□□ 0.26
PNKP-211ENST00000598020 C11orf42Q8N5U0 333 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 CORO2AQ92828 525 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 FAM46BQ96A09 425 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 COQ2Q96H96 371 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 PCGF1Q9BSM1 259 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 TMEM59Q9BXS4 323 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 RNF167Q9H6Y7 350 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms