RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GHRLQ9UBU3 117 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 SSR3Q9UNL2 185 aa16.18■□□□□ 0.18
SHKBP1-214ENST00000597396 A0A0G2JK05 382 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 FUOMA2VDF0 154 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 HSPB6O14558 160 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 PDCD5O14737 125 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 CRTAPO75718 401 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 OR7C1O76099 320 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 UBBP0CG47 229 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 FPR2P25090 351 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 TMEM200BQ69YZ2 307 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 BPIFB2Q8N4F0 458 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 TPRX1Q8N7U7 411 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 OR6M1Q8NGM8 313 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 LHX4Q969G2 390 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 MRPS24Q96EL2 167 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 C1orf147Q96MC9 270 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 MS4A7Q9GZW8 240 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 CST11Q9H112 138 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 BANF2Q9H503 90 aa16.17■□□□□ 0.18
SHKBP1-214ENST00000597396 TRAV1-2A0A0B4J238 106 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 hADV38S2A0JD32 116 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 GEMIN2O14893 280 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 MGMTP16455 207 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 CD36P16671 472 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 PSMD7P51665 324 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 MEF2CQ06413 473 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 ZNF273Q14593 569 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 ATXN7L3Q14CW9 347 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 MPV17LQ2QL34 196 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 C22orf15Q8WYQ4 148 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 GFI1Q99684 422 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 SELENOIQ9C0D9 397 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 TXNL4BQ9NX01 149 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 ING3Q9NXR8 418 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 V9GY05 133 aa16.16■□□□□ 0.18
SHKBP1-214ENST00000597396 FBN3Q75N90 2809 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 SVEP1Q4LDE5 3571 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 TRAV24A0A0B4J272 114 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 hCG_1809904A0A1W2PP81 198 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 A0A1W2PPE2 198 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 A0A1W2PR64 198 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 A0A1W2PRV1 198 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 MEX3AA1L020 520 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 SLC17A2O00624 439 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 SLC22A1O15245 554 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 CSN2P05814 226 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 CCL3L1P16619 93 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 ERP29P30040 261 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 P2RX3P56373 397 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 RAB11BQ15907 218 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 TAF9Q16594 264 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 ATAD3CQ5T2N8 411 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 C1orf122Q6ZSJ8 110 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 TRAPPC6BQ86SZ2 158 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 Q8N7P7 452 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 FAM46BQ96A09 425 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 OR51E2Q9H255 320 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 METTL8Q9H825 291 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 ZNF69Q9UC07 566 aa16.15■□□□□ 0.18
SHKBP1-214ENST00000597396 MXRA5Q9NR99 2828 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 MPIG6BO95866 241 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 CD37P11049 281 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 FGF9P31371 208 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 RANBP1P43487 201 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 AESQ08117 197 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 P2RY14Q15391 338 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 KRBOX4Q5JUW0 171 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 BRD3OSQ6XYD6 125 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 PDZD9Q8IXQ8 264 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 SUMF2Q8NBJ7 301 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 TMEM104Q8NE00 496 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 NEK7Q8TDX7 302 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 ZNF418Q8TF45 676 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 SLC6A7Q99884 636 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 CHCHD6Q9BRQ6 235 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 DPCDQ9BVM2 203 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 IFT22Q9H7X7 185 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 LINC00312Q9Y6C7 94 aa16.14■□□□□ 0.17
SHKBP1-214ENST00000597396 LOC100506127A0A0U1RQW1 187 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 CENPVL3A0A0U1RRI6 287 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 RNF212BA8MTL3 300 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 BPNT1O95861 308 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 ZNF728P0DKX0 622 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 RAB3BP20337 219 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 PRTN3P24158 256 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 GADD45AP24522 165 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 GLIPR1P48060 266 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 KCNJ3P48549 501 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 DLX1P56177 255 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 BPIFB3P59826 476 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 PRB3Q04118 309 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 NCR3LG1Q68D85 454 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 KCNG3Q8TAE7 436 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 COQ2Q96H96 371 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 Q96M66 194 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 ZNF714Q96N38 554 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 SUCNR1Q9BXA5 334 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 TMEM59Q9BXS4 323 aa16.13■□□□□ 0.17
SHKBP1-214ENST00000597396 BARHL1Q9BZE3 327 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms