RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 COMMD4Q9H0A8 199 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 FRRS1LQ9P0K9 344 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 GLS2Q9UI32 602 aa12.29□□□□□ -0.44
LIG1-214ENST00000597146 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 AZGP1P25311 298 aaKnown RBP12.28□□□□□ -0.44
LIG1-214ENST00000597146 ECI1P42126 302 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 KIR3DL2P43630 455 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 CCR9P51686 369 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 SLC34A1Q06495 639 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 IL24Q13007 206 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
LIG1-214ENST00000597146 MED21Q13503 144 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 UBE2V2Q15819 145 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 ZNF626Q68DY1 528 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 TMPRSS11AQ6ZMR5 421 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 SLC25A26Q70HW3 274 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 DHRSXQ8N5I4 330 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 CEP19Q96LK0 163 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 P2RX4Q99571 388 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
LIG1-214ENST00000597146 MEX3AA1L020 520 aaKnown RBP12.27□□□□□ -0.45
LIG1-214ENST00000597146 NUDT19A8MXV4 375 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 NOS1APO75052 506 aaPredicted RBP12.27□□□□□ -0.45
LIG1-214ENST00000597146 ATF1P18846 271 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 CD24P25063 80 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 POU3F4P49335 361 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 RAB25P57735 213 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 RCN1Q15293 331 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 LPCAT4Q643R3 524 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 FDX2Q6P4F2 183 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 Q6ZSR3 168 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 CALHM1Q8IU99 346 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 ASCC1Q8N9N2 400 aaKnown RBP12.27□□□□□ -0.45
LIG1-214ENST00000597146 SETD9Q8NE22 299 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 SLAMF9Q96A28 289 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 SDSLQ96GA7 329 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 NRIP2Q9BQI9 281 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 CHST5Q9GZS9 411 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 ERVK13-1Q9NX77 482 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 MYRFQ9Y2G1 1151 aa12.27□□□□□ -0.45
LIG1-214ENST00000597146 TRBV2A0A0J9YWF9 115 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 FAM90A22PA8MWA6 464 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 J3QRE1 110 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 ISG15P05161 165 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 PIPP12273 146 aaPredicted RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 GABRB1P18505 474 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 MYL12AP19105 171 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 MYCNOSP40205 109 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 DLX6P56179 175 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 GDPD3Q7L5L3 318 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 SYS1Q8N2H4 156 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 OSR2Q8N2R0 312 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 CD177Q8N6Q3 437 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 KLHL30-AS1Q8NEE0 82 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 DNAAF1Q8NEP3 725 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 OR52I1Q8NGK6 324 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 HAVCR2Q8TDQ0 301 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 EMG1Q92979 244 aaKnown RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 PELI1Q96FA3 418 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 VCXQ9H320 206 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 ISG20L2Q9H9L3 353 aaKnown RBP12.26□□□□□ -0.45
LIG1-214ENST00000597146 SORL1Q92673 2214 aa12.26□□□□□ -0.45
LIG1-214ENST00000597146 MAGEB3O15480 346 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 HCKP08631 526 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 MPZP25189 248 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 NANOS3P60323 173 aaKnown RBP12.25□□□□□ -0.45
LIG1-214ENST00000597146 ISL1P61371 349 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 Q8IYB0 196 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 PACRGLQ8N7B6 248 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 DHDHQ9UQ10 334 aa12.25□□□□□ -0.45
LIG1-214ENST00000597146 PSMB11A5LHX3 300 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 TMEM212A6NML5 194 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 OR4C45A6NMZ5 311 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 TK1P04183 234 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 AMY1AP04745 511 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 AMY2AP04746 511 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 GABRR1P24046 479 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 DCKP27707 260 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 SNU13P55769 128 aaKnown RBP12.24□□□□□ -0.45
LIG1-214ENST00000597146 EDDM3BP56851 147 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 UTS2BQ765I0 119 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 OVCH2Q7RTZ1 564 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 SERPINA12Q8IW75 414 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 OR11H6Q8NGC7 330 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 OR13C9Q8NGT0 318 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 SPSB1Q96BD6 273 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms