RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NCOR1P1Q9H4R4 102 aa10.59□□□□□ -0.71
USE1-207ENST00000596136 C16orf95Q9H693 158 aa10.59□□□□□ -0.71
USE1-207ENST00000596136 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
USE1-207ENST00000596136 TBL2Q9Y4P3 447 aaKnown RBP10.59□□□□□ -0.71
USE1-207ENST00000596136 TRBV5-7A0A0A0MS05 114 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 FSTP19883 344 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 COX7A1P24310 79 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 TGFBR2P37173 567 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 PTGFRP43088 359 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 LGALS4P56470 323 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 WNT4P56705 351 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 DOC2BQ14184 412 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 IL13RA2Q14627 380 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 LRRC75BQ2VPJ9 315 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 NHLRC3Q5JS37 347 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 C6orf141Q5SZD1 244 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 LDLRAD2Q5SZI1 272 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 Q6ZSV7 163 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 AHSA2Q719I0 299 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 OR13C5Q8NGS8 318 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 TNFAIP8L1Q8WVP5 186 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 MALSU1Q96EH3 234 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 ZNF696Q9H7X3 374 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
USE1-207ENST00000596136 MEX3AA1L020 520 aaKnown RBP10.57□□□□□ -0.72
USE1-207ENST00000596136 H3BUX3 64 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 DEGS1O15121 323 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 CLPXO76031 633 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 CGB3P0DN86 165 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 CGB7P0DN87 165 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 ZNF44P15621 663 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 BDKRB2P30411 391 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 ZNF93P35789 620 aaPredicted RBP10.57□□□□□ -0.72
USE1-207ENST00000596136 GLIPR1P48060 266 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 PROK1P58294 105 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 PPP3R1P63098 170 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 BDH1Q02338 343 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 AESQ08117 197 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 PRR31Q5SQ13 230 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 SATL1Q86VE3 508 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 DYNAPQ8N1N2 210 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 ZFP41Q8N8Y5 198 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 ORAI1Q96D31 301 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 COQ2Q96H96 371 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 GPER1Q99527 375 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 CDCA4Q9BXL8 241 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 TMEM133Q9H2Q1 129 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 PPA2Q9H2U2 334 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
USE1-207ENST00000596136 TRGV10A0A0A0MS01 117 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 ODAMA1E959 279 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 MEGF11A6BM72 1044 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 MYL12BO14950 172 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 MMP23AO75900 390 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 ARG1P05089 322 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 CDK1P06493 297 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 CD34P28906 385 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 OR3A4PP47883 348 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 AQP4P55087 323 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 SCN1BQ07699 218 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 RIPK1Q13546 671 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 RSU1Q15404 277 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 DDI2Q5TDH0 399 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 MINOS1Q5TGZ0 78 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 DHRS7BQ6IAN0 325 aaPredicted RBP10.56□□□□□ -0.72
USE1-207ENST00000596136 LYPD6Q86Y78 171 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 CDH26Q8IXH8 852 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 FOXRED1Q96CU9 486 aaPredicted RBP10.56□□□□□ -0.72
USE1-207ENST00000596136 CITED1Q99966 193 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 METTL9Q9H1A3 318 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 GAL3ST2Q9H3Q3 398 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 LINC00574Q9H8X3 128 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 FOXJ3Q9UPW0 622 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 ERGIC3Q9Y282 383 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 LSM2Q9Y333 95 aaKnown RBP10.56□□□□□ -0.72
USE1-207ENST00000596136 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
USE1-207ENST00000596136 TRAV8-7A0A075B6U6 113 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 A0A087X0M5 115 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 IGHV2-26A0A0B4J1V2 119 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 A0A1B0GX30 115 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 PIN1P1O15428 100 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 ZNF780AO75290 641 aaPredicted RBP10.55□□□□□ -0.72
USE1-207ENST00000596136 CDRT1O95170 752 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 CELP19835 753 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 MYF6P23409 242 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 PAX6P26367 422 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 KCNJ3P48549 501 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 DYNLT3P51808 116 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 SLC35A2P78381 396 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 IRF3Q14653 427 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 KRBOX4Q5JUW0 171 aa10.55□□□□□ -0.72
USE1-207ENST00000596136 OR52W1Q6IF63 320 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms