RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CHATP28329 748 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 DYNLT3P51808 116 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 RAB25P57735 213 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 IL24Q13007 206 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 ALKBH1Q13686 389 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 ANGPTL5Q86XS5 388 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 CD177Q8N6Q3 437 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 OR51A4Q8NGJ6 313 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 SDSLQ96GA7 329 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 P2RX4Q99571 388 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 C8orf4Q9NR00 106 aa10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 NKX1-2Q9UD57 310 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-208ENST00000595726 IGKV1-9A0A0C4DH69 117 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 hCG_1809904A0A1W2PP81 198 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 A0A1W2PPE2 198 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 A0A1W2PPH5 198 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 A0A1W2PR64 198 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 A0A1W2PRV1 198 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 RFPL4AA6NLU0 287 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 OR4C45A6NMZ5 311 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 RFPL4AL1F8VTS6 287 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 NXPH2O95156 264 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 AMY1AP04745 511 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 AMY2AP04746 511 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 FUT6P51993 359 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 DLX6P56179 175 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 ERVK11-1P61568 191 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 RPL23AP62750 156 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 OR2W3Q7Z3T1 314 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 CNIH3Q8TBE1 160 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 BORCS8Q96FH0 119 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 MYCBPQ99417 103 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 JAM3Q9BX67 310 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 HHLA2Q9UM44 414 aa10.89□□□□□ -0.67
SHKBP1-208ENST00000595726 C17orf98A8MV24 154 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 NUDT19A8MXV4 375 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 E9PI62 339 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 CASQ2O14958 399 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 SERPINA3P01011 423 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 ZNF20P17024 532 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 AZGP1P25311 298 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 MYCNOSP40205 109 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 ADARB1P78563 741 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 C9orf152Q5JTZ5 239 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 OGFRL1Q5TC84 451 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 TTC23Q5W5X9 447 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 UTS2BQ765I0 119 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 OVCH2Q7RTZ1 564 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 EGFL6Q8IUX8 553 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 ZNF561Q8N587 486 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 DNAAF1Q8NEP3 725 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 OR11H6Q8NGC7 330 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 OR13D1Q8NGV5 346 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 FGGYQ96C11 551 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 MTCH1Q9NZJ7 389 aa10.88□□□□□ -0.67
SHKBP1-208ENST00000595726 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 F8VVB4 439 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 F8VWA3 439 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 SLC1A7O00341 560 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 ATF1P18846 271 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 PRDX2P32119 198 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 RBP2P50120 134 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 MRPL28Q13084 256 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 SLC25A26Q70HW3 274 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 OSR2Q8N2R0 312 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 DHRSXQ8N5I4 330 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 ZNF676Q8N7Q3 588 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 KLHL30-AS1Q8NEE0 82 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 SLAMF9Q96A28 289 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 CEP19Q96LK0 163 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 OR14J1Q9UGF5 321 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 SCOCQ9UIL1 159 aa10.87□□□□□ -0.67
SHKBP1-208ENST00000595726 TMEM212A6NML5 194 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 DCKP27707 260 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 ETV1P50549 477 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 GBX2P52951 348 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 ATP1B3P54709 279 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 LHFPL2Q6ZUX7 228 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 OR13C9Q8NGT0 318 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 NDNFQ8TB73 568 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 HAVCR2Q8TDQ0 301 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 CAPSLQ8WWF8 208 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 SPSB1Q96BD6 273 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 PDCD1LG2Q9BQ51 273 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 DSCAML1Q8TD84 2053 aa10.86□□□□□ -0.67
SHKBP1-208ENST00000595726 INMTO95050 263 aa10.85□□□□□ -0.67
SHKBP1-208ENST00000595726 MT-ND2P03891 347 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms