RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 METTL9Q9H1A3 318 aa12.58□□□□□ -0.39
USE1-206ENST00000595101 MRPS28Q9Y2Q9 187 aaKnown RBP12.58□□□□□ -0.39
USE1-206ENST00000595101 M0R1W7 72 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 GLIPR1P48060 266 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 BRICD5Q6PL45 260 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 ZNF782Q6ZMW2 699 aaPredicted RBP12.58□□□□□ -0.4
USE1-206ENST00000595101 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 CMTM4Q8IZR5 234 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
USE1-206ENST00000595101 GFI1Q99684 422 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 TCF7L1Q9HCS4 588 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 GLS2Q9UI32 602 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
USE1-206ENST00000595101 A0A0U1RQK1 487 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 RNF212BA8MTL3 300 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 GEMIN2O14893 280 aaKnown RBP12.57□□□□□ -0.4
USE1-206ENST00000595101 PRTN3P24158 256 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 PAX6P26367 422 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 ATXN7L3Q14CW9 347 aaPredicted RBP12.57□□□□□ -0.4
USE1-206ENST00000595101 HSD17B12Q53GQ0 312 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 USP43Q70EL4 1123 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 TMEM104Q8NE00 496 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 OR5D13Q8NGL4 314 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
USE1-206ENST00000595101 COQ2Q96H96 371 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 DMRTB1Q96MA1 342 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 SUCNR1Q9BXA5 334 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 YTHDF1Q9BYJ9 559 aaKnown RBP12.57□□□□□ -0.4
USE1-206ENST00000595101 KCNK15Q9H427 330 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 BANF2Q9H503 90 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
USE1-206ENST00000595101 LRRC42Q9Y546 428 aa12.57□□□□□ -0.4
USE1-206ENST00000595101 MMP23AO75900 390 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 SCGB2A2Q13296 93 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 UBE2UQ5VVX9 321 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 AWAT2Q6E213 333 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 IL36GQ9NZH8 169 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 MGST3O14880 152 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 CSTBP04080 98 aaKnown RBP12.56□□□□□ -0.4
USE1-206ENST00000595101 GABRA5P31644 462 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 P2RX3P56373 397 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 RBM11P57052 281 aaKnown RBP12.56□□□□□ -0.4
USE1-206ENST00000595101 TAF9Q16594 264 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 OR10K2Q6IF99 312 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 BAIAP2L2Q6UXY1 529 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 S100A13Q99584 98 aa12.56□□□□□ -0.4
USE1-206ENST00000595101 UNKLQ9H9P5 680 aaKnown RBP12.56□□□□□ -0.4
USE1-206ENST00000595101 RABL2AQ9UBK7 228 aaPredicted RBP12.56□□□□□ -0.4
USE1-206ENST00000595101 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 PSMB9P28065 219 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 ZNF773Q6PK81 442 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.55□□□□□ -0.4
USE1-206ENST00000595101 PLPPR1Q8TBJ4 325 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 FAM46BQ96A09 425 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 C19orf24Q9BVV8 132 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 TNFRSF19Q9NS68 423 aa12.55□□□□□ -0.4
USE1-206ENST00000595101 AK6Q9Y3D8 172 aaKnown RBP12.55□□□□□ -0.4
USE1-206ENST00000595101 TRAV39A0A0B4J263 110 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 C17orf98A8MV24 154 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
USE1-206ENST00000595101 OR7C1O76099 320 aaPredicted RBP12.54□□□□□ -0.4
USE1-206ENST00000595101 COX7A1P24310 79 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 ERP29P30040 261 aaKnown RBP12.54□□□□□ -0.4
USE1-206ENST00000595101 BMXP51813 675 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 BAMBIQ13145 260 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 BLMHQ13867 455 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 PAN3Q58A45 887 aaKnown RBP12.54□□□□□ -0.4
USE1-206ENST00000595101 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 UTF1Q5T230 341 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 CDH26Q8IXH8 852 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 SVOPQ8N4V2 548 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 NKAIN3Q8N8D7 197 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 SUMF2Q8NBJ7 301 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 TBC1D15Q8TC07 691 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 THRSPQ92748 146 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 NDUFB11Q9NX14 153 aa12.54□□□□□ -0.4
USE1-206ENST00000595101 A0A0A6YYJ9 748 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 hADV38S2A0JD32 116 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 FAM25EA8MYX2 175 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 NPFFO15130 113 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
USE1-206ENST00000595101 GTF2F2P13984 249 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 OMGP23515 440 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 GDNFP39905 211 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 UBE2E1P51965 193 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 UBA52P62987 128 aaKnown RBP12.53□□□□□ -0.4
USE1-206ENST00000595101 SLC9A3R2Q15599 337 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 NHLRC3Q5JS37 347 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
USE1-206ENST00000595101 ZNF714Q96N38 554 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms