RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 USP9XQ93008 2570 aaPredicted RBP12.8□□□□□ -0.36
VRK3-207ENST00000594092 UBE2QL1A1L167 161 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 BOLA2-SMG1P6H3BVE0 249 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 PMP2P02689 132 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 GLRA1P23415 457 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 CCL8P80075 99 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 CD300CQ08708 224 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 ZNF146Q15072 292 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 MUC15Q8N387 334 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 HDHD3Q9BSH5 251 aaPredicted RBP12.79□□□□□ -0.36
VRK3-207ENST00000594092 GCM1Q9NP62 436 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
VRK3-207ENST00000594092 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
VRK3-207ENST00000594092 TRAV24A0A0B4J272 114 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 EGR1P18146 543 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 DTYMKP23919 212 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 MECP2P51608 486 aaKnown RBP12.78□□□□□ -0.36
VRK3-207ENST00000594092 TAS2R46P59540 309 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
VRK3-207ENST00000594092 SWI5Q1ZZU3 235 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 MICBQ29980 383 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 FAM209AQ5JX71 171 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 VAX1Q5SQQ9 334 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 FIP1L1Q6UN15 594 aaKnown RBP12.78□□□□□ -0.36
VRK3-207ENST00000594092 ERGIC1Q969X5 290 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 BEX2Q9BXY8 128 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 CHST6Q9GZX3 395 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 SPACA1Q9HBV2 294 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 DEGS1O15121 323 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 RLN1P04808 185 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 CBX3Q13185 183 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 TESK1Q15569 626 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 METTL11BQ5VVY1 283 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 Q8TCH9 128 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 MS4A5Q9H3V2 200 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 RASL12Q9NYN1 266 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 CHD6Q8TD26 2715 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 ARFGEF3Q5TH69 2177 aa12.78□□□□□ -0.36
VRK3-207ENST00000594092 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.37
VRK3-207ENST00000594092 HSPB6O14558 160 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 HS3ST1O14792 307 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 SH2D1BO14796 132 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 OR2H2O95918 312 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 LHBP01229 141 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 FCGR3AP08637 254 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 ZNF44P15621 663 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 TNFRSF1AP19438 455 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 OR3A3P47888 321 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 CHRFAM7AQ494W8 412 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 ARRDC1Q8N5I2 433 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 RDH5Q92781 318 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 MED28Q9H204 178 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 OR51J1Q9H342 316 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 C12orf4Q9NQ89 552 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
VRK3-207ENST00000594092 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
VRK3-207ENST00000594092 UBR5O95071 2799 aaPredicted RBP12.77□□□□□ -0.37
VRK3-207ENST00000594092 MCRIP1C9JLW8 97 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 HAND1O96004 215 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 KNG1P01042 644 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 IL5P05113 134 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 GLAP06280 429 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 ARPC4P59998 168 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 MEX3BQ6ZN04 569 aaKnown RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 OR5AP2Q8NGF4 316 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 OR6F1Q8NGZ6 308 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 DPCDQ9BVM2 203 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 EGLN1Q9GZT9 426 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 SAP30LQ9HAJ7 183 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 OR14J1Q9UGF5 321 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 PPP1R3CQ9UQK1 317 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 FAM221AA4D161 298 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 SIRPB1O00241 398 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 SLC33A1O00400 549 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 CEBPDP49716 269 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 TSPAN5P62079 268 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 SNRPD2P62316 118 aaKnown RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
VRK3-207ENST00000594092 GLDNQ6ZMI3 551 aaPredicted RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 TMEM17Q86X19 198 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 TGIF2LYQ8IUE0 185 aa12.76□□□□□ -0.37
VRK3-207ENST00000594092 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
VRK3-207ENST00000594092 OR13C8Q8NGS7 320 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms