RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CASQ2O14958 399 aaPredicted RBP11.81□□□□□ -0.52
PNKP-202ENST00000593706 SERPINA3P01011 423 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 GABRR1P24046 479 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 NPBWR2P48146 333 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 ARHGDIBP52566 201 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 MRPL28Q13084 256 aaKnown RBP11.81□□□□□ -0.52
PNKP-202ENST00000593706 GRK1Q15835 563 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 OGFRL1Q5TC84 451 aaPredicted RBP11.81□□□□□ -0.52
PNKP-202ENST00000593706 XAF1Q6GPH4 301 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 ZNF529Q6P280 563 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 TPRX1Q8N7U7 411 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 ZNF555Q8NEP9 628 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 OR13C3Q8NGS6 347 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 MRPL48Q96GC5 212 aaKnown RBP11.81□□□□□ -0.52
PNKP-202ENST00000593706 SNX22Q96L94 193 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 CHST6Q9GZX3 395 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
PNKP-202ENST00000593706 RBFOX1Q9NWB1 397 aaKnown RBP11.81□□□□□ -0.52
PNKP-202ENST00000593706 IGKV1-12A0A0C4DH73 117 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 TCRBV4S1A1TA0A5B7 111 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 TMEM82A0PJX8 343 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 HAND1O96004 215 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 IGKV1D-12P01611 117 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 ZNF20P17024 532 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 PRKACBP22694 351 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 HTR1DP28221 377 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 ETV1P50549 477 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 CD83Q01151 205 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 PDZK1IP1Q13113 114 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 LHFPL2Q6ZUX7 228 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 Q8IYB0 196 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 PARP16Q8N5Y8 322 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 FBLIM1Q8WUP2 373 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 OPALINQ96PE5 141 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 MYCBPQ99417 103 aaPredicted RBP11.8□□□□□ -0.52
PNKP-202ENST00000593706 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 OCSTAMPQ9BR26 566 aa11.8□□□□□ -0.52
PNKP-202ENST00000593706 TSSC4Q9Y5U2 329 aaPredicted RBP11.8□□□□□ -0.52
PNKP-202ENST00000593706 K7EIL1 84 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 GNAO1P09471 354 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 BCL3P20749 454 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 DCKP27707 260 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 GTF2A1P52655 376 aaPredicted RBP11.79□□□□□ -0.52
PNKP-202ENST00000593706 ATP1B3P54709 279 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 MTCP1P56278 107 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 ZNF146Q15072 292 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 TTC23Q5W5X9 447 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 ZNF485Q8NCK3 441 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 HAVCR2Q8TDQ0 301 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 CYGBQ8WWM9 190 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
PNKP-202ENST00000593706 SLC25A33Q9BSK2 321 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 LIN7BQ9HAP6 207 aa11.79□□□□□ -0.52
PNKP-202ENST00000593706 DIMT1Q9UNQ2 313 aaKnown RBP11.79□□□□□ -0.52
PNKP-202ENST00000593706 FAM90A22PA8MWA6 464 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 PSPNO60542 156 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 KDM4BO94953 1096 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
PNKP-202ENST00000593706 CYB5AP00167 134 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 LPLP06858 475 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 RPSAP08865 295 aaKnown RBP11.78□□□□□ -0.52
PNKP-202ENST00000593706 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 CD24P25063 80 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 BRS3P32247 399 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 POU3F4P49335 361 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 GBX2P52951 348 aaPredicted RBP11.78□□□□□ -0.52
PNKP-202ENST00000593706 SNU13P55769 128 aaKnown RBP11.78□□□□□ -0.52
PNKP-202ENST00000593706 ZP1P60852 638 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 CDK5R1Q15078 307 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 CCDC58Q4VC31 144 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 OR2G6Q5TZ20 316 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 C11orf87Q6NUJ2 197 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 OR4P4Q8NGL7 312 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 OR5AK2Q8NH90 309 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 DPF1Q92782 380 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 MYDGFQ969H8 173 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 ZCCHC4Q9H5U6 513 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 HMG20AQ9NP66 347 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 GLS2Q9UI32 602 aa11.78□□□□□ -0.52
PNKP-202ENST00000593706 SIRT4Q9Y6E7 314 aaPredicted RBP11.78□□□□□ -0.52
PNKP-202ENST00000593706 FAM172BPA6NC97 362 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 SULT1B1O43704 296 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 LALBAP00709 142 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 PRKACAP17612 351 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 DUSP1P28562 367 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 TCTEX1D4Q5JR98 221 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 SPIN3Q5JUX0 258 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 PRAMEF5Q5TYX0 476 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 OR52W1Q6IF63 320 aa11.77□□□□□ -0.53
PNKP-202ENST00000593706 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms