RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 FGGYQ96C11 551 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 CIB1Q99828 191 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 PPIL3Q9H2H8 161 aaKnown RBP12.98□□□□□ -0.33
LIG1-205ENST00000593425 COL7A1Q02388 2944 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 A0A087X0M5 115 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 A0A1B0GX30 115 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 TOR1AO14656 332 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 CSN2P05814 226 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 ZNF44P15621 663 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 ZNF20P17024 532 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 ATP6V1E1P36543 226 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 CEACAM3P40198 252 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 NANOS3P60323 173 aaKnown RBP12.97□□□□□ -0.33
LIG1-205ENST00000593425 SCN1BQ07699 218 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 RBM39Q14498 530 aaKnown RBP12.97□□□□□ -0.33
LIG1-205ENST00000593425 ATXN7L3Q14CW9 347 aaPredicted RBP12.97□□□□□ -0.33
LIG1-205ENST00000593425 KRBOX4Q5JUW0 171 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 Q6P435 159 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 C18orf65Q6ZTR6 163 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 ZNF329Q86UD4 541 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 OR10AC1Q8NH08 325 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 SPSB1Q96BD6 273 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 MBOAT4Q96T53 435 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 ZNF649Q9BS31 505 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 HSPE1-MOB4S4R3N1 261 aa12.97□□□□□ -0.33
LIG1-205ENST00000593425 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 PSMB11A5LHX3 300 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 M0QZK8 103 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.33
LIG1-205ENST00000593425 CD69Q07108 199 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 ZDHHC13Q8IUH4 622 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 OR4D6Q8NGJ1 314 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 OR51A4Q8NGJ6 313 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
LIG1-205ENST00000593425 FAM90A18PA6NE21 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A16PA6NEW6 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A20PA6NIJ5 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A12PA8MX19 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A5PA8MXJ8 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 OOSP1A8MZH6 123 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 ISG15P05161 165 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 SNRNP70P08621 437 aaKnown RBP12.95□□□□□ -0.34
LIG1-205ENST00000593425 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A15PP0C7V4 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A13PP0C7W8 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A14PP0C7W9 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 FAM90A24PP0C7X0 464 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 NFYBP25208 207 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 MNDAP41218 407 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 THBS3P49746 956 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 PRRX1P54821 245 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 RPL23AP62750 156 aaKnown RBP12.95□□□□□ -0.34
LIG1-205ENST00000593425 TMED1Q13445 227 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 CCDC144NLQ6NUI1 221 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 OR8J1Q8NGP2 316 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 KIRREL1Q96J84 757 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 NOL4LQ96MY1 436 aaPredicted RBP12.95□□□□□ -0.34
LIG1-205ENST00000593425 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 RIBC2Q9H4K1 309 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
LIG1-205ENST00000593425 E9PQ18 207 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 IGHV3-7P01780 117 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 OCM2P0CE71 109 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 OCMP0CE72 109 aaPredicted RBP12.94□□□□□ -0.34
LIG1-205ENST00000593425 DIAPH2-AS1Q14236 149 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 CDK5R1Q15078 307 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 C5orf56Q8N8D9 126 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 OR51D1Q8NGF3 324 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 OR56B4Q8NH76 319 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 OR9G1Q8NH87 305 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 DPF1Q92782 380 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 LEAP2Q969E1 77 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 TOMM40LQ969M1 308 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 RPEQ96AT9 228 aa12.94□□□□□ -0.34
LIG1-205ENST00000593425 NBEAL2Q6ZNJ1 2754 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 A0A1W2PPI3 338 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 HSPB6O14558 160 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 MT-ND2P03891 347 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 CGB3P0DN86 165 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 CGB7P0DN87 165 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 FASP25445 335 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 GLP1RP43220 463 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 ZP1P60852 638 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 FDX2Q6P4F2 183 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 OR2W3Q7Z3T1 314 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 THNSL2Q86YJ6 484 aa12.93□□□□□ -0.34
LIG1-205ENST00000593425 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms