RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TRGV10A0A0A0MS01 117 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 VGLL3A8MV65 326 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 TIMM23O14925 209 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 DEGS1O15121 323 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 OGG1O15527 345 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 CD2P06729 351 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 JUNBP17275 347 aaPredicted RBP11.21□□□□□ -0.61
APOC1-208ENST00000592535 MTNR1BP49286 362 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 ATXN7L3Q14CW9 347 aaPredicted RBP11.21□□□□□ -0.61
APOC1-208ENST00000592535 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.61
APOC1-208ENST00000592535 PRAMEF5Q5TYX0 476 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 CHST4Q8NCG5 386 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 PXT1Q8NFP0 134 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 OR13C5Q8NGS8 318 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 TNFAIP8L1Q8WVP5 186 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 GGHQ92820 318 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 ORAI1Q96D31 301 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 SMIM19Q96E16 107 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 COQ2Q96H96 371 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 TMEM80Q96HE8 168 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 NR1H4Q96RI1 486 aaPredicted RBP11.21□□□□□ -0.61
APOC1-208ENST00000592535 GPER1Q99527 375 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 RAB18Q9NP72 206 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 BABAM2Q9NXR7 383 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 TCF19Q9Y242 345 aa11.21□□□□□ -0.61
APOC1-208ENST00000592535 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.62
APOC1-208ENST00000592535 WNK1Q9H4A3 2382 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 ODAMA1E959 279 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 FUOMA2VDF0 154 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 H0YJX3 145 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 M0QZ24 198 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 MAGEB3O15480 346 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 CSN2P05814 226 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 GNAO1P09471 354 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 GDNFP39905 211 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 CAPGP40121 348 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 KIR2DS4P43632 304 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 EFNB2P52799 333 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 KRBOX4Q5JUW0 171 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 ELP2Q6IA86 826 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 LAIR2Q6ISS4 152 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 CCBE1Q6UXH8 406 aaPredicted RBP11.2□□□□□ -0.62
APOC1-208ENST00000592535 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 OR52N1Q8NH53 320 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 CORO2AQ92828 525 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 TMEM106AQ96A25 262 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 CPNE2Q96FN4 548 aaPredicted RBP11.2□□□□□ -0.62
APOC1-208ENST00000592535 CLEC7AQ9BXN2 247 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 FAM192AQ9GZU8 254 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 PPIL3Q9H2H8 161 aaKnown RBP11.2□□□□□ -0.62
APOC1-208ENST00000592535 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
APOC1-208ENST00000592535 ABCB10Q9NRK6 738 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 TAS2R3Q9NYW6 316 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 HSPE1-MOB4S4R3N1 261 aa11.2□□□□□ -0.62
APOC1-208ENST00000592535 TRRAPQ9Y4A5 3859 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 FAM172BPA6NC97 362 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 A6NDX4 124 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 HSPB6O14558 160 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 XPNPEP2O43895 674 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 ALDOBP05062 364 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 CDK2P24941 298 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 OR3A4PP47883 348 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 ST3GAL4Q11206 333 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 MED21Q13503 144 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 DMKNQ6E0U4 476 aaPredicted RBP11.19□□□□□ -0.62
APOC1-208ENST00000592535 HEPN1Q6WQI6 88 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 TMEM219Q86XT9 240 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 C8orf59Q8N0T1 100 aaPredicted RBP11.19□□□□□ -0.62
APOC1-208ENST00000592535 ZNF485Q8NCK3 441 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 OR51T1Q8NGJ9 327 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 OR4P4Q8NGL7 312 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 CHCHD3Q9NX63 227 aaKnown RBP11.19□□□□□ -0.62
APOC1-208ENST00000592535 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
APOC1-208ENST00000592535 TRAV24A0A0B4J272 114 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 WIPF1O43516 503 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 CDRT1O95170 752 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 HTR3BO95264 441 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 PTGFRP43088 359 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 DYNLT3P51808 116 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 PPP3R1P63098 170 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 RSU1Q15404 277 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 PIGYQ3MUY2 71 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 PAN3Q58A45 887 aaKnown RBP11.18□□□□□ -0.62
APOC1-208ENST00000592535 DDI2Q5TDH0 399 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 OR52W1Q6IF63 320 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 ASCL4Q6XD76 172 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
APOC1-208ENST00000592535 Q8NFD4 153 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms