RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 DOC2BQ14184 412 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 SLC22A6Q4U2R8 563 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 PAN3Q58A45 887 aaKnown RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 KRBOX4Q5JUW0 171 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 LIPKQ5VXJ0 399 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 C16orf87Q6PH81 154 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF782Q6ZMW2 699 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 C17orf107Q6ZR85 190 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 PRSS48Q7RTY5 328 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 CEACAM19Q7Z692 300 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 OSR2Q8N2R0 312 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 PNKDQ8N490 385 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 SSMEM1Q8WWF3 244 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 SGCDQ92629 289 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 TMEM203Q969S6 136 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 MUL1Q969V5 352 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF714Q96N38 554 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 DERL3Q96Q80 235 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 BARHL1Q9BZE3 327 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 PPA2Q9H2U2 334 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 DUSP21Q9H596 190 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 UNKLQ9H9P5 680 aaKnown RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 ST3GAL6Q9Y274 331 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 LINC00312Q9Y6C7 94 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 CLDN34H7C241 214 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 OR7C1O76099 320 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-227ENST00000591849 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
BRCA1-227ENST00000591849 MELTFP08582 738 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 GTF2F2P13984 249 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 FSTP19883 344 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 ERP29P30040 261 aaKnown RBP8.24□□□□□ -1.09
BRCA1-227ENST00000591849 SAA4P35542 130 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 MAP2K4P45985 399 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 OR3A1P47881 315 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 IL13RA2Q14627 380 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 IRF3Q14653 427 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 TRAM1Q15629 374 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 MIDNQ504T8 468 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 GLT8D1Q68CQ7 371 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 AWAT2Q6E213 333 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 ELP2Q6IA86 826 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 ASPHD2Q6ICH7 369 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 Q6P435 159 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 GLIPR1L1Q6UWM5 242 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 CDH26Q8IXH8 852 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 TMEM86BQ8N661 226 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 NEK7Q8TDX7 302 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 TNFRSF14Q92956 283 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 FOXRED1Q96CU9 486 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-227ENST00000591849 GAL3ST2Q9H3Q3 398 aa8.24□□□□□ -1.09
BRCA1-227ENST00000591849 MEIKINA0A087WXM9 373 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 C17orf98A8MV24 154 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 SLC33A1O00400 549 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-227ENST00000591849 PIN1P1O15428 100 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 RBP4P02753 201 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ARG1P05089 322 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 IGHV1-8P0DP01 117 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 LMO1P25800 156 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 GLIPR1P48060 266 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 FOXL1Q12952 345 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 MLLT11Q13015 90 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ATXN7L3Q14CW9 347 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-227ENST00000591849 PIGYQ3MUY2 71 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 OR52W1Q6IF63 320 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 CRIP3Q6Q6R5 217 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 UNQ9370/PRO34162Q6UXP9 181 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ASCL4Q6XD76 172 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 NKAIN3Q8N8D7 197 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF565Q8N9K5 539 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 OR4D6Q8NGJ1 314 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 OR51T1Q8NGJ9 327 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 MGLLQ99685 303 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 PRDM13Q9H4Q3 707 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ISYNA1Q9NPH2 558 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 IL36GQ9NZH8 169 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 OR6C3Q9NZP0 311 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 LSM2Q9Y333 95 aaKnown RBP8.23□□□□□ -1.09
BRCA1-227ENST00000591849 UBE2J1Q9Y385 318 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-227ENST00000591849 POMT1Q9Y6A1 747 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 SESN1Q9Y6P5 492 aa8.23□□□□□ -1.09
BRCA1-227ENST00000591849 ANK2Q01484 3957 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 SVEP1Q4LDE5 3571 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 ODAMA1E959 279 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 TMEM89A2RUT3 159 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 MAGEA13PA6NCF6 341 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 H3BUI4 141 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 CRTAPO75718 401 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 ARL6IP5O75915 188 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 IGHV4-59P01825 116 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 SRMP19623 302 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 PSMA1P25786 263 aaKnown RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 GLP1RP43220 463 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 RANBP1P43487 201 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 KCNJ3P48549 501 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms