RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC9A3R2Q15599 337 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 SLC22A6Q4U2R8 563 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 UTF1Q5T230 341 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 FIP1L1Q6UN15 594 aaKnown RBP9.41□□□□□ -0.9
VMP1-211ENST00000591315 Q8NFD4 153 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 GFI1Q99684 422 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 KCNK15Q9H427 330 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 METTL8Q9H825 291 aaKnown RBP9.41□□□□□ -0.9
VMP1-211ENST00000591315 CKLFQ9UBR5 152 aa9.41□□□□□ -0.9
VMP1-211ENST00000591315 MRPS28Q9Y2Q9 187 aaKnown RBP9.41□□□□□ -0.9
VMP1-211ENST00000591315 A0A0A6YYJ9 748 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 C17orf98A8MV24 154 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 MGST3O14880 152 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 NPFFO15130 113 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 SC5DO75845 299 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 ZNF728P0DKX0 622 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 GDNFP39905 211 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 BMXP51813 675 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 P2RX3P56373 397 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 FABP5Q01469 135 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 MLLT11Q13015 90 aaPredicted RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 TBCEQ15813 527 aaPredicted RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 RBMS3Q6XE24 437 aaKnown RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 C1orf122Q6ZSJ8 110 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 SPARTQ8N0X7 666 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 TMEM104Q8NE00 496 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 OR51T1Q8NGJ9 327 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 OR5D13Q8NGL4 314 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 PLPPR1Q8TBJ4 325 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 DMRTB1Q96MA1 342 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 METTL9Q9H1A3 318 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 BANF2Q9H503 90 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 UNKLQ9H9P5 680 aaKnown RBP9.4□□□□□ -0.9
VMP1-211ENST00000591315 ISYNA1Q9NPH2 558 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 GLS2Q9UI32 602 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 BLOC1S6Q9UL45 172 aa9.4□□□□□ -0.9
VMP1-211ENST00000591315 IGHV4-59P01825 116 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 MELTFP08582 738 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 UCHL1P09936 223 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 SAA4P35542 130 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
VMP1-211ENST00000591315 GABARAPL2P60520 117 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 GPR50Q13585 617 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 BLMHQ13867 455 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 TAF9Q16594 264 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 PAN3Q58A45 887 aaKnown RBP9.39□□□□□ -0.91
VMP1-211ENST00000591315 LDLRAD2Q5SZI1 272 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 PRAMEF5Q5TYX0 476 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 Q6YL49 198 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 OSR2Q8N2R0 312 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 CPNE2Q96FN4 548 aaPredicted RBP9.39□□□□□ -0.91
VMP1-211ENST00000591315 PRDM13Q9H4Q3 707 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 Q9H521 79 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 IL36GQ9NZH8 169 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 ST3GAL6Q9Y274 331 aa9.39□□□□□ -0.91
VMP1-211ENST00000591315 hADV38S2A0JD32 116 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 SHISA3A0PJX4 238 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 ODAMA1E959 279 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 MEIOCA2RUB1 952 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 FAM172BPA6NC97 362 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 TRIM77I1YAP6 450 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
VMP1-211ENST00000591315 SRMP19623 302 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 MAPK3P27361 379 aaPredicted RBP9.38□□□□□ -0.91
VMP1-211ENST00000591315 UBE2E1P51965 193 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 MEF2CQ06413 473 aaPredicted RBP9.38□□□□□ -0.91
VMP1-211ENST00000591315 IL13RA2Q14627 380 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 HSD17B12Q53GQ0 312 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 DYNAPQ8N1N2 210 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 SUMF2Q8NBJ7 301 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 FAM216AQ8WUB2 273 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 FAM46BQ96A09 425 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 RHOFQ9HBH0 211 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 TCF7L1Q9HCS4 588 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 KIF25Q9UIL4 384 aa9.38□□□□□ -0.91
VMP1-211ENST00000591315 AK6Q9Y3D8 172 aaKnown RBP9.38□□□□□ -0.91
VMP1-211ENST00000591315 CSTBP04080 98 aaKnown RBP9.37□□□□□ -0.91
VMP1-211ENST00000591315 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
VMP1-211ENST00000591315 OMGP23515 440 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
VMP1-211ENST00000591315 BPIFB3P59826 476 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 P2RY14Q15391 338 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
VMP1-211ENST00000591315 RSBN1Q5VWQ0 802 aaPredicted RBP9.37□□□□□ -0.91
VMP1-211ENST00000591315 NCR3LG1Q68D85 454 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms