RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 C2orf76Q3KRA6 126 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 PAN3Q58A45 887 aaKnown RBP15.83■□□□□ 0.12
DDX39A-214ENST00000590556 SLC16A12Q6ZSM3 486 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 DACT3Q96B18 629 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-214ENST00000590556 TMEM59Q9BXS4 323 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 PPA2Q9H2U2 334 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 IFT22Q9H7X7 185 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 ZNF581Q9P0T4 197 aa15.83■□□□□ 0.12
DDX39A-214ENST00000590556 TRAV24A0A0B4J272 114 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A10PA6NDY2 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A18PA6NE21 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A16PA6NEW6 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A20PA6NIJ5 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A8PA6NJQ4 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A7PA6NKC0 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A22PA8MWA6 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A12PA8MX19 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A5PA8MXJ8 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A23PA8MXZ1 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 MGST3O14880 152 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A15PP0C7V4 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A13PP0C7W8 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A14PP0C7W9 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 FAM90A24PP0C7X0 464 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 PPIAL4GP0DN37 164 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 EDDM3BP56851 147 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 VBP1P61758 197 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 RPS27AP62979 156 aaKnown RBP15.82■□□□□ 0.12
DDX39A-214ENST00000590556 UNC119Q13432 240 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 EDDM3AQ14507 147 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 CR1LQ2VPA4 569 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 ATAD3CQ5T2N8 411 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 SFXN4Q6P4A7 337 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 METAP1DQ6UB28 335 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-214ENST00000590556 LY6G5BQ8NDX9 201 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 OR4M1Q8NGD0 313 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 C8orf46Q8TAG6 207 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 C7orf69Q9H7B7 122 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 LIN7BQ9HAP6 207 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 DAPK2Q9UIK4 370 aa15.82■□□□□ 0.12
DDX39A-214ENST00000590556 A0A1W2PQ09 198 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 HSPB6O14558 160 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 GABARAPO95166 117 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 SERPINB10P48595 397 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 RPL31P62899 125 aaKnown RBP15.81■□□□□ 0.12
DDX39A-214ENST00000590556 PAX8Q06710 450 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 CTF1Q16619 201 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 CLVS1Q8IUQ0 354 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-214ENST00000590556 FAM185AQ8N0U4 392 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 SUMF2Q8NBJ7 301 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 POM121Q96HA1 1249 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 MRI1Q9BV20 369 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 DPCDQ9BVM2 203 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-214ENST00000590556 TMPRSS13Q9BYE2 586 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 SPACA1Q9HBV2 294 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 C19orf12Q9NSK7 152 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 TMEM160Q9NX00 188 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 FBLN5Q9UBX5 448 aa15.81■□□□□ 0.12
DDX39A-214ENST00000590556 NSD1Q96L73 2696 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-214ENST00000590556 A0A0B4J203 849 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 TMEM272A0A1B0GTI8 110 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 FUOMA2VDF0 154 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 H3BUI4 141 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 IL1AP01583 271 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 RPS19P39019 145 aaKnown RBP15.8■□□□□ 0.12
DDX39A-214ENST00000590556 FAM120AOSQ5T036 256 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 BPIFB2Q8N4F0 458 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 DMRTB1Q96MA1 342 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 URM1Q9BTM9 101 aaKnown RBP15.8■□□□□ 0.12
DDX39A-214ENST00000590556 TM2D1Q9BX74 207 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 ONECUT1Q9UBC0 465 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 RAB22AQ9UL26 194 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 AUP1Q9Y679 476 aa15.8■□□□□ 0.12
DDX39A-214ENST00000590556 LDLRAD4O15165 306 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 CSN2P05814 226 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 FUT3P21217 361 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 ERP29P30040 261 aaKnown RBP15.79■□□□□ 0.12
DDX39A-214ENST00000590556 P2RX3P56373 397 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 ARF6P62330 175 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 AESQ08117 197 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 ATXN7L3Q14CW9 347 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-214ENST00000590556 IDNKQ5T6J7 187 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 TMEM200BQ69YZ2 307 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 RAB12Q6IQ22 244 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 CROCCP3Q8IVE0 287 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 LPAR5Q9H1C0 372 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 ING3Q9NXR8 418 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 RCC2Q9P258 522 aaKnown RBP15.79■□□□□ 0.12
DDX39A-214ENST00000590556 LPAR3Q9UBY5 353 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 PEX16Q9Y5Y5 336 aa15.79■□□□□ 0.12
DDX39A-214ENST00000590556 A0A1W2PPH5 198 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 MCRIP1C9JLW8 97 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 INAFM1C9JVW0 142 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 HNF1AP20823 631 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 KCNJ3P48549 501 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 MEF2CQ06413 473 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-214ENST00000590556 KRBOX4Q5JUW0 171 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 BRICD5Q6PL45 260 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 LURAP1LQ8IV03 231 aa15.78■□□□□ 0.12
DDX39A-214ENST00000590556 CMTM4Q8IZR5 234 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms