RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PLGRKTQ9HBL7 147 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 SSR3Q9UNL2 185 aa17.53■□□□□ 0.4
ATG4D-212ENST00000590096 PDCD5O14737 125 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 GEMIN2O14893 280 aaKnown RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 ERP29P30040 261 aaKnown RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 PSMD7P51665 324 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 MEF2CQ06413 473 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 MPV17LQ2QL34 196 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 PAN3Q58A45 887 aaKnown RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 C22orf42Q6IC83 251 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 BPIFB2Q8N4F0 458 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 OR6M1Q8NGM8 313 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 C1orf147Q96MC9 270 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 MS4A7Q9GZW8 240 aaPredicted RBP17.52■□□□□ 0.4
ATG4D-212ENST00000590096 OCEL1Q9H607 264 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 SIRT7Q9NRC8 400 aa17.52■□□□□ 0.4
ATG4D-212ENST00000590096 TRAV1-2A0A0B4J238 106 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 hCG_1809904A0A1W2PP81 198 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 A0A1W2PPE2 198 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 A0A1W2PR64 198 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 A0A1W2PRV1 198 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 hADV38S2A0JD32 116 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 COL6A5A8TX70 2615 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 HSPB6O14558 160 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 CSN2P05814 226 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 MGMTP16455 207 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 RANBP1P43487 201 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 ATRQ13535 2644 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 ZNF273Q14593 569 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 TPRX1Q8N7U7 411 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 LHX4Q969G2 390 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 BANF2Q9H503 90 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 METTL8Q9H825 291 aaKnown RBP17.51■□□□□ 0.39
ATG4D-212ENST00000590096 V9GY05 133 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 MXRA5Q9NR99 2828 aa17.51■□□□□ 0.39
ATG4D-212ENST00000590096 TRAV24A0A0B4J272 114 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 SLC22A1O15245 554 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 CD37P11049 281 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 CD36P16671 472 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 FGF9P31371 208 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-212ENST00000590096 P2RX3P56373 397 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 BPIFB3P59826 476 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 ATXN7L3Q14CW9 347 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-212ENST00000590096 TAF9Q16594 264 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 ATAD3CQ5T2N8 411 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 TRAPPC6BQ86SZ2 158 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 PRIMA1Q86XR5 153 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 Q8N7P7 452 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 C22orf15Q8WYQ4 148 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 GFI1Q99684 422 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 SELENOIQ9C0D9 397 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 IFT22Q9H7X7 185 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 TXNL4BQ9NX01 149 aaKnown RBP17.5■□□□□ 0.39
ATG4D-212ENST00000590096 ZNF69Q9UC07 566 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 LINC00312Q9Y6C7 94 aa17.5■□□□□ 0.39
ATG4D-212ENST00000590096 CENPVL3A0A0U1RRI6 287 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 SLC17A2O00624 439 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 BPNT1O95861 308 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 CCL3L1P16619 93 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 KCNJ3P48549 501 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 AESQ08117 197 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 RAB11BQ15907 218 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 KRBOX4Q5JUW0 171 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 SUMF2Q8NBJ7 301 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 TMEM104Q8NE00 496 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 FAM46BQ96A09 425 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 ZNF714Q96N38 554 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 DPCDQ9BVM2 203 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-212ENST00000590096 OR51E2Q9H255 320 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 ING3Q9NXR8 418 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 DSCAML1Q8TD84 2053 aa17.49■□□□□ 0.39
ATG4D-212ENST00000590096 MEX3AA1L020 520 aaKnown RBP17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A10PA6NDY2 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A18PA6NE21 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A16PA6NEW6 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A20PA6NIJ5 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A8PA6NJQ4 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A7PA6NKC0 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A22PA8MWA6 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A12PA8MX19 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A5PA8MXJ8 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A23PA8MXZ1 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 MPIG6BO95866 241 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A15PP0C7V4 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A13PP0C7W8 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A14PP0C7W9 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 FAM90A24PP0C7X0 464 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 ZNF728P0DKX0 622 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 RAB3BP20337 219 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 PRTN3P24158 256 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 GUCA2AQ02747 115 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 NCR3LG1Q68D85 454 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 BRD3OSQ6XYD6 125 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 PDZD9Q8IXQ8 264 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 KCNG3Q8TAE7 436 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 ZNF418Q8TF45 676 aaPredicted RBP17.48■□□□□ 0.39
ATG4D-212ENST00000590096 Q96M66 194 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 SLC6A7Q99884 636 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 CHCHD6Q9BRQ6 235 aa17.48■□□□□ 0.39
ATG4D-212ENST00000590096 SUCNR1Q9BXA5 334 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms