RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SAT2Q96F10 170 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 ZNF629Q9UEG4 869 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 NSG2Q9Y328 171 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 TMED3Q9Y3Q3 217 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 LSM5Q9Y4Y9 91 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 CDRT15L2A8MXV6 281 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 ZNF205O95201 554 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 GAPDHP04406 335 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 PRKACAP17612 351 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 IL24Q13007 206 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 HAGHLQ6PII5 290 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 Q6ZPA2 131 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 MSI2Q96DH6 328 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 OR2S2Q9NQN1 319 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 LHX6Q9UPM6 363 aa16.42■□□□□ 0.22
PRKCSH-209ENST00000589838 TRDCB7Z8K6 153 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 BET1O15155 118 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 MPPED1O15442 326 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 ZNHIT1O43257 154 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 JTBO76095 146 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 RND3P61587 244 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 IGSF11Q5DX21 431 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 ZNF565Q8N9K5 539 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 BPIFCQ8NFQ6 507 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 GLYATL2Q8WU03 294 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 TAF9BQ9HBM6 251 aa16.41■□□□□ 0.22
PRKCSH-209ENST00000589838 PHF1O43189 567 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 SYNGR1O43759 233 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 SLC34A2O95436 690 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 SCGB1D2O95969 90 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 APOC3P02656 99 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 LYZL2Q7Z4W2 148 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
PRKCSH-209ENST00000589838 C3orf85A0A1B0GTC6 90 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 IGHG3P01860 377 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 FAM157CP0CG43 387 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 UBE2NP61088 152 aaKnown RBP16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 TAGLNQ01995 201 aaKnown RBP16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 TMPRSS7Q7RTY8 843 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 FAM58AQ8N1B3 248 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 LPAR3Q9UBY5 353 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 ATP23Q9Y6H3 246 aa16.39■□□□□ 0.22
PRKCSH-209ENST00000589838 NCOR1O75376 2440 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 TRBV6-6A0A0A6YYG2 114 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 MBPP02686 304 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 BTN1A1Q13410 526 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 GPR157Q5UAW9 335 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 RPL7L1Q6DKI1 246 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 FBXW12Q6X9E4 464 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 IL34Q6ZMJ4 242 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 OR11L1Q8NGX0 322 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 NARS2Q96I59 477 aaKnown RBP16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 RTL8AQ9BWD3 113 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 CDH20Q9HBT6 801 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 MMP26Q9NRE1 261 aa16.39■□□□□ 0.21
PRKCSH-209ENST00000589838 ZNF705EA8MWA4 302 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 J3QT63 122 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 GPR31O00270 319 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 ST8SIA3O43173 380 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 FTH1P19P0C7X4 201 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 IL32P24001 234 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 CCL11P51671 97 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 OR2T2Q6IF00 324 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 OR2A2Q6IF42 318 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 LDLRAD3Q86YD5 345 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 SUMF2Q8NBJ7 301 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 HS3ST6Q96QI5 342 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 OR51I2Q9H344 312 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 IFT22Q9H7X7 185 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 COQ3Q9NZJ6 369 aa16.38■□□□□ 0.21
PRKCSH-209ENST00000589838 HOXB1P14653 301 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 GNRHRP30968 328 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 BLOC1S1P78537 153 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SPIN3Q5JUX0 258 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 Q8IYB0 196 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 DEFB124Q8NES8 71 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SPIN2AQ99865 258 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SPIN2BQ9BPZ2 258 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM222Q9H0R3 208 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 CLCF1Q9UBD9 225 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 FBXL17Q9UF56 701 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 UBE2J1Q9Y385 318 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 PIGBOS1A0A0B4J2F0 54 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 NKX2-8O15522 239 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 GPR137BO60478 399 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 TUSC2O75896 110 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 CDS2O95674 445 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SCTP09683 121 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 ZNF14P17017 642 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 CA6P23280 308 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 P2RY1P47900 373 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 KCNJ3P48549 501 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM33P57088 247 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 FAM219AQ8IW50 185 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SECTM1Q8WVN6 248 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 SMIM8Q96KF7 97 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 OR51B6Q9H340 312 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 AMDHD2Q9Y303 409 aa16.37■□□□□ 0.21
PRKCSH-209ENST00000589838 BORCS7-ASMTA0A0B4J1R7 106 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms