RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 MPTX1A8MV57 137 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 F8VVB4 439 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 F8VWA3 439 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 LYZL6O75951 148 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 TK1P04183 234 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 TPT1P13693 172 aaKnown RBP13.05□□□□□ -0.32
MBD1-217ENST00000588937 RAC2P15153 192 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 CBR1P16152 277 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
MBD1-217ENST00000588937 NAAAQ02083 359 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 SMCO1Q147U7 214 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 ZNF169Q14929 603 aaPredicted RBP13.05□□□□□ -0.32
MBD1-217ENST00000588937 IAH1Q2TAA2 248 aaPredicted RBP13.05□□□□□ -0.32
MBD1-217ENST00000588937 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 CXorf58Q96LI9 332 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
MBD1-217ENST00000588937 LRP5LA4QPB2 252 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 H0YIZ8 118 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 LILRA1O75019 489 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 PPYP01298 95 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 COX5AP20674 150 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 AADACP22760 399 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
MBD1-217ENST00000588937 RAB32Q13637 225 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
MBD1-217ENST00000588937 TMEM187Q14656 261 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 LRRC20Q8TCA0 184 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 IFT22Q9H7X7 185 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 TUBD1Q9UJT1 453 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SSUH2Q9Y2M2 353 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 POLDIP2Q9Y2S7 368 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 CELA3BP08861 270 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 TUBG1P23258 451 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 UCP2P55851 309 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 S100A10P60903 97 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SRPXP78539 464 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 ACSF3Q4G176 576 aaPredicted RBP13.04□□□□□ -0.32
MBD1-217ENST00000588937 PAN3Q58A45 887 aaKnown RBP13.04□□□□□ -0.32
MBD1-217ENST00000588937 GGNBP1Q5YKI7 109 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 IGFL3Q6UXB1 125 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 Q6ZPA2 131 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 LIAT1Q6ZQX7 453 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 LGI3Q8N145 548 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 C9orf106Q8NAJ2 232 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SUMF2Q8NBJ7 301 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 CNTNAP3BQ96NU0 1288 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 CNTNAP3Q9BZ76 1288 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 SHARPINQ9H0F6 387 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 TUBG2Q9NRH3 451 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 ZFP57Q9NU63 452 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 FBXO9Q9UK97 447 aaPredicted RBP13.04□□□□□ -0.32
MBD1-217ENST00000588937 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
MBD1-217ENST00000588937 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 PHLDA2Q53GA4 152 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 FAM76BQ5HYJ3 339 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 HSD17B13Q7Z5P4 300 aaPredicted RBP13.03□□□□□ -0.32
MBD1-217ENST00000588937 C17orf78Q8N4C9 275 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 OR1J1Q8NGS3 322 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 OBP2BQ9NPH6 170 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 OR5AC2Q9NZP5 309 aa13.03□□□□□ -0.32
MBD1-217ENST00000588937 A0A1W2PR80 420 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 TAAR5O14804 337 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 IGKV3-15P01624 115 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.32
MBD1-217ENST00000588937 EIF5AP63241 154 aaKnown RBP13.02□□□□□ -0.32
MBD1-217ENST00000588937 IGSF11Q5DX21 431 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 EIF4E3Q8N5X7 224 aaKnown RBP13.02□□□□□ -0.32
MBD1-217ENST00000588937 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 RELL2Q8NC24 303 aaPredicted RBP13.02□□□□□ -0.32
MBD1-217ENST00000588937 SLC25A40Q8TBP6 338 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.32
MBD1-217ENST00000588937 DNTTIP1Q9H147 329 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 IL36RNQ9UBH0 155 aa13.02□□□□□ -0.32
MBD1-217ENST00000588937 TMEM210A6NLX4 147 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 H7C1Q1 480 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 DEGS1O15121 323 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 ZP3P21754 424 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 RND3P61587 244 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 VWA1Q6PCB0 445 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 MYPOPQ86VE0 399 aaPredicted RBP13.02□□□□□ -0.33
MBD1-217ENST00000588937 MRPL24Q96A35 216 aaKnown RBP13.02□□□□□ -0.33
MBD1-217ENST00000588937 ADAT1Q9BUB4 502 aaKnown RBP13.02□□□□□ -0.33
MBD1-217ENST00000588937 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 PROCRQ9UNN8 238 aa13.02□□□□□ -0.33
MBD1-217ENST00000588937 SPTBN2O15020 2390 aa13.01□□□□□ -0.33
MBD1-217ENST00000588937 KRBOX1C9JBD0 128 aa13.01□□□□□ -0.33
MBD1-217ENST00000588937 MPPED1O15442 326 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms