RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ASAH1Q13510 395 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 ZNF57Q68EA5 555 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-208ENST00000588667 NLRC3Q7RTR2 1065 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 CALHM1Q8IU99 346 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 OR56B1Q8NGI3 324 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 OR10K1Q8NGX5 313 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 OR10R2Q8NGX6 335 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 YAE1D1Q9NRH1 226 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 TBC1D24Q9ULP9 559 aa16.8■□□□□ 0.28
ATG4D-208ENST00000588667 A0A1W2PP11 408 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 A8MV72 311 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-208ENST00000588667 HTR3BO95264 441 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 WNT2P09544 360 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 CD3GP09693 182 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 IL24Q13007 206 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 OXA1LQ15070 435 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 MOGAT2Q3SYC2 334 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 SLC25A26Q70HW3 274 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 MKXQ8IYA7 352 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 CENPSQ8N2Z9 138 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 POC1AQ8NBT0 407 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 OR51T1Q8NGJ9 327 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 MRPS24Q96EL2 167 aaKnown RBP16.79■□□□□ 0.28
ATG4D-208ENST00000588667 NEIL1Q96FI4 390 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-208ENST00000588667 SELENOIQ9C0D9 397 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 WDR13Q9H1Z4 485 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 LPAR2Q9HBW0 351 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 DNAJB11Q9UBS4 358 aa16.79■□□□□ 0.28
ATG4D-208ENST00000588667 IGHV3OR15-7A0A075B7D8 119 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 LINC00854A0A1B0GVQ3 168 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 SYNGR1O43759 233 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 PGA5P0DJD9 388 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 GLRA1P23415 457 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 PRSS3P35030 304 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 DVL1P1P54792 670 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 GMFBP60983 142 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 ESCO2Q56NI9 601 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 RNASE12Q5GAN4 147 aaKnown RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 GLCCI1Q86VQ1 547 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 CHST4Q8NCG5 386 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 OR8B3Q8NGG8 313 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 OR52I2Q8NH67 350 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 OR8B2Q96RD0 313 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 TM2D1Q9BX74 207 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 AUNIPQ9H7T9 357 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 KCNS2Q9ULS6 477 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 ANK3Q12955 4377 aaKnown RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 IGKV1-12A0A0C4DH73 117 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 A8MXK9 166 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 TNFRSF13BO14836 293 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 NOS1APO75052 506 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 FOXH1O75593 365 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 IGKV1D-12P01611 117 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 GYPAP02724 150 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 ACAA1P09110 424 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 SEC61A1P61619 476 aaKnown RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 LYPD2Q6UXB3 125 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 TOMM5Q8N4H5 51 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 FAM89BQ8N5H3 189 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 GCDHQ92947 438 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-208ENST00000588667 TMEM186Q96B77 213 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 SEH1LQ96EE3 360 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 NRIP2Q9BQI9 281 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 NICN1Q9BSH3 213 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 RASL12Q9NYN1 266 aa16.78■□□□□ 0.28
ATG4D-208ENST00000588667 ZFHX3Q15911 3703 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 NIPBLQ6KC79 2804 aaeCLIP16.77■□□□□ 0.27
ATG4D-208ENST00000588667 TRAV20A0A0B4J274 112 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 SULT1C2O00338 296 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 LANCL1O43813 399 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 PTHLHP12272 177 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 GDNFP39905 211 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 STUMQ69YW2 141 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 MZT2BQ6NZ67 158 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 RAB3CQ96E17 227 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 SSBP3Q9BWW4 388 aaPredicted RBP16.77■□□□□ 0.27
ATG4D-208ENST00000588667 OCEL1Q9H607 264 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 SCPEP1Q9HB40 452 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 NLKQ9UBE8 527 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 KAAG1Q9UBP8 84 aa16.77■□□□□ 0.27
ATG4D-208ENST00000588667 RBMX2Q9Y388 322 aaKnown RBP16.77■□□□□ 0.27
ATG4D-208ENST00000588667 A0A0A6YYD4 124 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 ADAM20O43506 726 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 ORC5O43913 435 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 GSTT2BP0CG30 244 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 AP3S2P59780 193 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 LCN2P80188 198 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 ARL6IP1Q15041 203 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 SMIM21Q3B7S5 101 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 OSR2Q8N2R0 312 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 POM121Q96HA1 1249 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 Q96M66 194 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 ZNF488Q96MN9 340 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 DNTTIP1Q9H147 329 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 TMEM160Q9NX00 188 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 CTSZQ9UBR2 303 aa16.76■□□□□ 0.27
ATG4D-208ENST00000588667 POLR3KQ9Y2Y1 108 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-208ENST00000588667 SVEP1Q4LDE5 3571 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 TRAPPC2LH3BP13 241 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms