RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RHOFQ9HBH0 211 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 POMPQ9Y244 141 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 HSPE1-MOB4S4R3N1 261 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 IGKV1-12A0A0C4DH73 117 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A5PA8MXJ8 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 G3V2T6 193 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 GYG2O15488 501 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 KDM4BO94953 1096 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 APOL3O95236 402 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 IGKV1D-12P01611 117 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 CSN2P05814 226 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A15PP0C7V4 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A13PP0C7W8 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A14PP0C7W9 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FAM90A24PP0C7X0 464 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 SLC6A1P30531 599 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 OR3A4PP47883 348 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ISL1P61371 349 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
DNMT1-213ENST00000587604 KRBOX4Q5JUW0 171 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
DNMT1-213ENST00000587604 FGGYQ96C11 551 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 OPALINQ96PE5 141 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF649Q9BS31 505 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 PCDHB16Q9NRJ7 776 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ZFP57Q9NU63 452 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 GNG8Q9UK08 70 aa11.14□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
DNMT1-213ENST00000587604 ISG15P05161 165 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF44P15621 663 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 MYCNOSP40205 109 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF85Q03923 595 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 SCN1BQ07699 218 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 TMED1Q13445 227 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 RBM39Q14498 530 aaKnown RBP11.13□□□□□ -0.63
DNMT1-213ENST00000587604 C17orf58Q2M2W7 97 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 DNAL1Q4LDG9 190 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 TP53I3Q53FA7 332 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 Q6P435 159 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 UNQ9370/PRO34162Q6UXP9 181 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 OR2W3Q7Z3T1 314 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 FAM220AQ7Z4H9 259 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 OR2G2Q8NGZ5 317 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 OR9G1Q8NH87 305 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 CHPT1Q8WUD6 406 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 RPEQ96AT9 228 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 COQ2Q96H96 371 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 MBOAT4Q96T53 435 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 OR6C3Q9NZP0 311 aa11.13□□□□□ -0.63
DNMT1-213ENST00000587604 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 SLC33A1O00400 549 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-213ENST00000587604 DEGS1O15121 323 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 MT-ND2P03891 347 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 OCM2P0CE71 109 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 OCMP0CE72 109 aaPredicted RBP11.12□□□□□ -0.63
DNMT1-213ENST00000587604 CGB3P0DN86 165 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 CGB7P0DN87 165 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF20P17024 532 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 NFYBP25208 207 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 UTF1Q5T230 341 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 SAXO1Q8IYX7 474 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 ZNF565Q8N9K5 539 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 RFT1Q96AA3 541 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 GABARAPL1Q9H0R8 117 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
DNMT1-213ENST00000587604 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 J3QR06 171 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
DNMT1-213ENST00000587604 CCDC159P0C7I6 412 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
DNMT1-213ENST00000587604 ATP6AP1Q15904 470 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 FDX2Q6P4F2 183 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 C18orf65Q6ZTR6 163 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 C8orf86Q6ZUL3 223 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 KCTD20Q7Z5Y7 419 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 OR8J1Q8NGP2 316 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 OR56B4Q8NH76 319 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 RFKQ969G6 155 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 EME1Q96AY2 570 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 KIRREL1Q96J84 757 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 HRASLS5Q96KN8 279 aa11.11□□□□□ -0.63
DNMT1-213ENST00000587604 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms