RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 FHL3Q13643 280 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 HSP90B2PQ58FF3 399 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 NXNL2Q5VZ03 156 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 SSX6Q7RTT6 188 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 OR4D6Q8NGJ1 314 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 OR8U1Q8NH10 309 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 RPEQ96AT9 228 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 KIRREL1Q96J84 757 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 LINC00574Q9H8X3 128 aa11.1□□□□□ -0.63
CXXC1-208ENST00000587170 EXOSC4Q9NPD3 245 aaKnown RBP11.1□□□□□ -0.63
CXXC1-208ENST00000587170 AMMECR1Q9Y4X0 333 aaPredicted RBP11.1□□□□□ -0.63
CXXC1-208ENST00000587170 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 SH2D1BO14796 132 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 CYB5AP00167 134 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 CRISP1P54107 249 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 ATP1B3P54709 279 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 KPNB1Q14974 876 aaKnown RBP11.09□□□□□ -0.63
CXXC1-208ENST00000587170 UTS2BQ765I0 119 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 OR8H3Q8N146 312 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 CHST4Q8NCG5 386 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 Q8NFD4 153 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 FAM107BQ9H098 131 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 DCLRE1BQ9H816 532 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 RHOFQ9HBH0 211 aa11.09□□□□□ -0.63
CXXC1-208ENST00000587170 IGKV1-12A0A0C4DH73 117 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 LCE6AA0A183 80 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 KBTBD11-OT1A0A1B0GTJ5 212 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 J3QR06 171 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 SULT1C4O75897 302 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 DCTN3O75935 186 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 KDM4BO94953 1096 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 RPP14O95059 124 aaKnown RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 SERPINA3P01011 423 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 IGKV1D-12P01611 117 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 KRT8P05787 483 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 TMEM11P17152 192 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 PRKACGP22612 351 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 CDX1P47902 265 aaPredicted RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 POU3F4P49335 361 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 RAB7AP51149 207 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 ISL1P61371 349 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 EBI3Q14213 229 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 RBM39Q14498 530 aaKnown RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 ODF4Q2M2E3 257 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 Q6P435 159 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 FAHD1Q6P587 224 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 TEX38Q6PEX7 206 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 LHFPL2Q6ZUX7 228 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 PRSS35Q8N3Z0 413 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 YIPF7Q8N8F6 280 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 CANT1Q8WVQ1 401 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 SPSB1Q96BD6 273 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 ADAT3Q96EY9 351 aaPredicted RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 PRRG3Q9BZD7 231 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 NCOR1P1Q9H4R4 102 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 OR6C3Q9NZP0 311 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.64
CXXC1-208ENST00000587170 ARL2BPQ9Y2Y0 163 aa11.08□□□□□ -0.64
CXXC1-208ENST00000587170 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 B2RBV5 119 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 H3BSH0 61 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 M0R129 80 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 AP4M1O00189 453 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
CXXC1-208ENST00000587170 CCRL2O00421 344 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 GNGT2O14610 69 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 RPLP1P05386 114 aaKnown RBP11.07□□□□□ -0.64
CXXC1-208ENST00000587170 PRKACBP22694 351 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 KIR3DL2P43630 455 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 SNU13P55769 128 aaKnown RBP11.07□□□□□ -0.64
CXXC1-208ENST00000587170 MTCP1P56278 107 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 CBX1P83916 185 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 PAX5Q02548 391 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 CFHR3Q02985 330 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 FOXE3Q13461 319 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 KRBOX4Q5JUW0 171 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 TGIF2LXQ8IUE1 241 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 Q8N6K4 173 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 TMEM163Q8TC26 289 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 ASCL2Q99929 193 aa11.07□□□□□ -0.64
CXXC1-208ENST00000587170 PPIL3Q9H2H8 161 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms