RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 OR51D1Q8NGF3 324 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 OR8J1Q8NGP2 316 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 BCAS4Q8TDM0 211 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 FGGYQ96C11 551 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 MBOAT4Q96T53 435 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
MBD1-215ENST00000586884 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 PSMB11A5LHX3 300 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 SH2D7A6NKC9 451 aaPredicted RBP12.11□□□□□ -0.47
MBD1-215ENST00000586884 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
MBD1-215ENST00000586884 LY6LH3BQJ8 138 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 MT-ND2P03891 347 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 FAM106CPP0CH98 169 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 GDNFP39905 211 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 ZNF85Q03923 595 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 TP53I3Q53FA7 332 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 C9orf152Q5JTZ5 239 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 OR2G2Q8NGZ5 317 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
MBD1-215ENST00000586884 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
MBD1-215ENST00000586884 CIB1Q99828 191 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 MOB4Q9Y3A3 225 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 HSPE1-MOB4S4R3N1 261 aa12.11□□□□□ -0.47
MBD1-215ENST00000586884 ZNF44P15621 663 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 FASP25445 335 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 OR3A4PP47883 348 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 DCTN2Q13561 401 aaKnown RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 FDX2Q6P4F2 183 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 KCTD20Q7Z5Y7 419 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 THNSL2Q86YJ6 484 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 MRPL41Q8IXM3 137 aaKnown RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 OR9G1Q8NH87 305 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 EME1Q96AY2 570 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 MCRIP2Q9BUT9 160 aaKnown RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 NEK6Q9HC98 313 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 FRRS1LQ9P0K9 344 aa12.1□□□□□ -0.47
MBD1-215ENST00000586884 AMMECR1Q9Y4X0 333 aaPredicted RBP12.1□□□□□ -0.47
MBD1-215ENST00000586884 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
MBD1-215ENST00000586884 SLC6A1P30531 599 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 POLR2IP36954 125 aaKnown RBP12.09□□□□□ -0.47
MBD1-215ENST00000586884 CCR9P51686 369 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 CD69Q07108 199 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 SCN1BQ07699 218 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 C17orf58Q2M2W7 97 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 Q6P435 159 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 ETV3LQ6ZN32 361 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 OR5D18Q8NGL1 313 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 TOMM40LQ969M1 308 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 RPEQ96AT9 228 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 COQ2Q96H96 371 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 B9D2Q9BPU9 175 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 ZNF649Q9BS31 505 aa12.09□□□□□ -0.47
MBD1-215ENST00000586884 KBTBD11-OT1A0A1B0GTJ5 212 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A9PA6NNJ1 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 DEGS1O15121 323 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 SLC16A6O15403 523 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FCGR1AP12314 374 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 THBS3P49746 956 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
MBD1-215ENST00000586884 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
MBD1-215ENST00000586884 ATXN7L3Q14CW9 347 aaPredicted RBP12.08□□□□□ -0.48
MBD1-215ENST00000586884 ZNF565Q8N9K5 539 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 OR13C9Q8NGT0 318 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 CHPT1Q8WUD6 406 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 KIRREL1Q96J84 757 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 SPACA5Q96QH8 159 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 RIBC2Q9H4K1 309 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 ZFP57Q9NU63 452 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 ZMAT5Q9UDW3 170 aaKnown RBP12.08□□□□□ -0.48
MBD1-215ENST00000586884 AP4S1Q9Y587 144 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
MBD1-215ENST00000586884 FGF16O43320 207 aa12.07□□□□□ -0.48
MBD1-215ENST00000586884 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
MBD1-215ENST00000586884 HTR1AP08908 422 aa12.07□□□□□ -0.48
MBD1-215ENST00000586884 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
MBD1-215ENST00000586884 NFYBP25208 207 aa12.07□□□□□ -0.48
MBD1-215ENST00000586884 BNIP1Q12981 228 aa12.07□□□□□ -0.48
MBD1-215ENST00000586884 OR2W3Q7Z3T1 314 aa12.07□□□□□ -0.48
MBD1-215ENST00000586884 ZNF329Q86UD4 541 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms