RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
DNMT1-207ENST00000586588 PCGF1Q9BSM1 259 aa11.4□□□□□ -0.58
DNMT1-207ENST00000586588 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
DNMT1-207ENST00000586588 PRTFDC1Q9NRG1 225 aa11.4□□□□□ -0.58
DNMT1-207ENST00000586588 PLEKHJ1Q9NW61 149 aa11.4□□□□□ -0.58
DNMT1-207ENST00000586588 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
DNMT1-207ENST00000586588 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 TMED7-TICAM2A0A0A6YYA0 188 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF850A8MQ14 1090 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 PHF1O43189 567 aaPredicted RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF705DP0CH99 300 aaPredicted RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF705BP0CI00 300 aaPredicted RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 PVRP15151 417 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF92Q03936 586 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZP4Q12836 540 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ADIRFQ15847 76 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 BSXQ3C1V8 233 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 TEX43Q6ZNM6 134 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 DOK3Q7L591 496 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 GRINAQ7Z429 371 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 C6orf201Q7Z4U5 140 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 D2HGDHQ8N465 521 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 OR5L1Q8NGL2 311 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ADAMTS18Q8TE60 1221 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 APOOQ9BUR5 198 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ZNF665Q9H7R5 613 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 FGF22Q9HCT0 170 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 NXT1Q9UKK6 140 aaKnown RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 IGKV1D-43A0A0B4J1Z2 117 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 NKX2-6A6NCS4 301 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 DTYMKP23919 212 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 PHLDA2Q53GA4 152 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 OR8B12Q8NGG6 310 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 STARD5Q9NSY2 213 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 RNF150Q9ULK6 438 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 B3GALT1Q9Y5Z6 326 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 NPIPA5E9PKD4 350 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 MSTNO14793 375 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 YPEL1O60688 119 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 ONECUT2O95948 504 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 IFNA1P01562 189 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 SRP14P37108 136 aaKnown RBP11.39□□□□□ -0.59
DNMT1-207ENST00000586588 GPM6BQ13491 265 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 OR2T10Q8NGZ9 312 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 YPEL2Q96QA6 119 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 SMIM7Q9BQ49 75 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 NPIPA1Q9UND3 350 aa11.39□□□□□ -0.59
DNMT1-207ENST00000586588 PRSS38A1L453 326 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 SSSCA1O60232 199 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 RAB7AP51149 207 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 CPEB2Q7Z5Q1 589 aaKnown RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 RTN4RQ9BZR6 473 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 PRUNE2Q8WUY3 3088 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 MS4A18H0YCH9 400 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 PRKNO60260 465 aaPredicted RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 CST7O76096 145 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 SELENOTP62341 195 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 LCN2P80188 198 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 MS4A18Q3C1V0 323 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 C11orf42Q8N5U0 333 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 NECAP1Q8NC96 275 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 ADPRHL1Q8NDY3 354 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 FAM71F1Q96KD3 344 aaPredicted RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
DNMT1-207ENST00000586588 OR51B6Q9H340 312 aa11.38□□□□□ -0.59
DNMT1-207ENST00000586588 CLEC18AA5D8T8 446 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 KBTBD11O94819 623 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RAC1P63000 192 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RPS21P63220 83 aaKnown RBP11.37□□□□□ -0.59
DNMT1-207ENST00000586588 TMEM183BQ1AE95 376 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 SFTPA1Q8IWL2 248 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 CLEC18CQ8NCF0 446 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 OR5D18Q8NGL1 313 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 MOB3AQ96BX8 217 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RBKSQ9H477 322 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 DOCK9Q9BZ29 2069 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 MYO9BQ13459 2157 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 A0A0J9YY10 115 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 K7EP13 123 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 NUDT14O95848 222 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 HNRNPA1P09651 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
DNMT1-207ENST00000586588 GLI4P10075 376 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 FXYD4P59646 89 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RPL23P62829 140 aaKnown RBP11.37□□□□□ -0.59
DNMT1-207ENST00000586588 RIPPLY2Q5TAB7 128 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 OR1N1Q8NGS0 311 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 TMEM56Q96MV1 263 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
DNMT1-207ENST00000586588 ADOQ96SZ5 270 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms