RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DTX3Q8N9I9 347 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 NDNFQ8TB73 568 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 MYDGFQ969H8 173 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 FOXRED1Q96CU9 486 aaPredicted RBP9.29□□□□□ -0.92
LIG3-207ENST00000586119 ZNF714Q96N38 554 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 TBX5Q99593 518 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 ERVK13-1Q9NX77 482 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 PITPNC1Q9UKF7 332 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 TCRBV4S1A1TA0A5B7 111 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 MRPS14O60783 128 aaKnown RBP9.28□□□□□ -0.92
LIG3-207ENST00000586119 LPLP06858 475 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 PF4V1P10720 104 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 CRHBPP24387 322 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 GDNFP39905 211 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 DYNLT3P51808 116 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 SLC35A2P78381 396 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 ST3GAL4Q11206 333 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 TMPRSS11AQ6ZMR5 421 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 SLC25A26Q70HW3 274 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 RNF144BQ7Z419 303 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 RDH10Q8IZV5 341 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 OR8H2Q8N162 312 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 SNX22Q96L94 193 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 CEP19Q96LK0 163 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 ALG8Q9BVK2 526 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 PKIBQ9C010 78 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 DUSP21Q9H596 190 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 MOB1AQ9H8S9 216 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 MYRFQ9Y2G1 1151 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 SESN1Q9Y6P5 492 aa9.28□□□□□ -0.92
LIG3-207ENST00000586119 HAND1O96004 215 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 AMY1AP04745 511 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 AMY2AP04746 511 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 CDK1P06493 297 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 RPSAP08865 295 aaKnown RBP9.27□□□□□ -0.93
LIG3-207ENST00000586119 BCL3P20749 454 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 GABARAPL2P60520 117 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 GRK1Q15835 563 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 ABCA11PQ4W5N1 156 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 MINOS1Q5TGZ0 78 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 PRAMEF5Q5TYX0 476 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 AHSA2Q719I0 299 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 YIPF7Q8N8F6 280 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 OR52N1Q8NH53 320 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 ZNF649Q9BS31 505 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 RBFOX1Q9NWB1 397 aaKnown RBP9.27□□□□□ -0.93
LIG3-207ENST00000586119 PCDHGB5Q9Y5G0 923 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 SNX5Q9Y5X3 404 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 MINOS1-NBL1R4GNA1 71 aa9.27□□□□□ -0.93
LIG3-207ENST00000586119 hADV38S2A0JD32 116 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 RBP4P02753 201 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 LIMS3P0CW19 117 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 LIMS4P0CW20 117 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 CCL1P22362 96 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 GABRR1P24046 479 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 HTR1DP28221 377 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 MEF2CQ06413 473 aaPredicted RBP9.26□□□□□ -0.93
LIG3-207ENST00000586119 FDX2Q6P4F2 183 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 C18orf65Q6ZTR6 163 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 LHFPL3Q86UP9 236 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 CATSPERDQ86XM0 798 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 EMG1Q92979 244 aaKnown RBP9.26□□□□□ -0.93
LIG3-207ENST00000586119 CLEC7AQ9BXN2 247 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 GNG8Q9UK08 70 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 SLC7A11Q9UPY5 501 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 ERGIC3Q9Y282 383 aa9.26□□□□□ -0.93
LIG3-207ENST00000586119 IGKV1-9A0A0C4DH69 117 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 J3QLW9 94 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 SIRPB1O00241 398 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 SYT7O43581 403 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 RGS10O43665 173 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 PF4P02776 101 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 ZNF19P17023 458 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 OR3A1P47881 315 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 ETV1P50549 477 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 CCR9P51686 369 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 FUT6P51993 359 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 GBX2P52951 348 aaPredicted RBP9.25□□□□□ -0.93
LIG3-207ENST00000586119 KCTD21Q4G0X4 260 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 TP53I3Q53FA7 332 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 ABHD12Q8N2K0 398 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 PRSS35Q8N3Z0 413 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 CCDC54Q8NEL0 328 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 RNF166Q96A37 237 aaPredicted RBP9.25□□□□□ -0.93
LIG3-207ENST00000586119 RFT1Q96AA3 541 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 C4orf36Q96KX1 117 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 SLC25A33Q9BSK2 321 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 ING3Q9NXR8 418 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 TSSC4Q9Y5U2 329 aaPredicted RBP9.25□□□□□ -0.93
LIG3-207ENST00000586119 LINC00312Q9Y6C7 94 aa9.25□□□□□ -0.93
LIG3-207ENST00000586119 IGKV1-12A0A0C4DH73 117 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 MYL12BO14950 172 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 IGKV1D-12P01611 117 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 HTR1AP08908 422 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 CDK2P24941 298 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms