RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 UBE2E1P51965 193 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 EDDM3BP56851 147 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 RPL15P61313 204 aaKnown RBP11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 FABP5Q01469 135 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 CEACAM19Q7Z692 300 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 TSPAN14Q8NG11 270 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 ELL3Q9HB65 397 aaPredicted RBP11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 C19orf12Q9NSK7 152 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 UBE2J1Q9Y385 318 aaPredicted RBP11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 POMT1Q9Y6A1 747 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 A0A087WXM4 84 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 TMEM82A0PJX8 343 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 CCRL2O00421 344 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 DEGS1O15121 323 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF728P0DKX0 622 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 SMIM18P0DKX4 95 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 OR3A4PP47883 348 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 CEBPDP49716 269 aaPredicted RBP11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 P2RX3P56373 397 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 MIDNQ504T8 468 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 Q8N7P7 452 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 TNFRSF14Q92956 283 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 LHX4Q969G2 390 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 MUL1Q969V5 352 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF714Q96N38 554 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 CST11Q9H112 138 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 MRPS28Q9Y2Q9 187 aaKnown RBP11.34□□□□□ -0.59
PRKCSH-202ENST00000585540 TRGV10A0A0A0MS01 117 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 RNF212BA8MTL3 300 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 C17orf98A8MV24 154 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC33A1O00400 549 aaPredicted RBP11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 PSPNO60542 156 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 HTR3BO95264 441 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 BPNT1O95861 308 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 GLAP06280 429 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 FBP1P09467 338 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 CALCBP10092 127 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 SRMP19623 302 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 OR3A1P47881 315 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 TMEM200BQ69YZ2 307 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 Q6P435 159 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 LDLRAD3Q86YD5 345 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 OR13D1Q8NGV5 346 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 CORO2AQ92828 525 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 ZDHHC16Q969W1 377 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 NR1H4Q96RI1 486 aaPredicted RBP11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 BARHL1Q9BZE3 327 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
PRKCSH-202ENST00000585540 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 A0A0G2JK05 382 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 SIRPB1O00241 398 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 CA11O75493 328 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 CD37P11049 281 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 SERPINA2P20848 420 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 SNU13P55769 128 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 BAMBIQ13145 260 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 RBM39Q14498 530 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 OR4S1Q8NGB4 309 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 DPAGT1Q9H3H5 408 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 RAB9BQ9NP90 201 aa11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 TBL2Q9Y4P3 447 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 RNASEK-C17orf49H0YIS7 233 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 PDCD5O14737 125 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 NPFFO15130 113 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 CLPXO76031 633 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 VENTXO95231 258 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 RNASE1P07998 156 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 UBA52P62987 128 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 ZNF273Q14593 569 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 AANATQ16613 207 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 KRBOX4Q5JUW0 171 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 CD200R1LQ6Q8B3 271 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 GLIPR1L1Q6UWM5 242 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 BRD3OSQ6XYD6 125 aa11.31□□□□□ -0.6
PRKCSH-202ENST00000585540 Q6YL49 198 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms