RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 IGHV2-5P01817 119 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 TK1P04183 234 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 WNT2P09544 360 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 ELK1P19419 428 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 CHATP28329 748 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 KCNJ3P48549 501 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 NPY4RP50391 375 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 ESCO2Q56NI9 601 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 KRTAP1-3Q8IUG1 177 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 LAX1Q8IWV1 398 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 PPA2Q9H2U2 334 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 RCC2Q9P258 522 aaKnown RBP15.25■□□□□ 0.03
RFFL-211ENST00000584541 SLC25A10Q9UBX3 287 aaPredicted RBP15.25■□□□□ 0.03
RFFL-211ENST00000584541 HSF4Q9ULV5 492 aa15.25■□□□□ 0.03
RFFL-211ENST00000584541 DOCK11Q5JSL3 2073 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 IGHV4-61A0A0C4DH41 118 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 TMEM82A0PJX8 343 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 F5H0A9 414 aaPredicted RBP15.24■□□□□ 0.03
RFFL-211ENST00000584541 RAB27BO00194 218 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 DVL1O14640 695 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 PSPNO60542 156 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 ZNF737O75373 536 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 NDUFB7P17568 137 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 CDK2P24941 298 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 GNB2P62879 340 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 GRK1Q15835 563 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 MOGAT2Q3SYC2 334 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 TMEM69Q5SWH9 247 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 SIGIRRQ6IA17 410 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 C17orf107Q6ZR85 190 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 GDPD3Q7L5L3 318 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 BIVMQ86UB2 503 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 OR8H2Q8N162 312 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 ARHGAP5-AS1Q96IT6 56 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 CHST6Q9GZX3 395 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 MIXL1Q9H2W2 232 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 ZNF581Q9P0T4 197 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 CTSZQ9UBR2 303 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 CLN8Q9UBY8 286 aa15.24■□□□□ 0.03
RFFL-211ENST00000584541 A0A1B0GW55 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 FUOMA2VDF0 154 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 FOXI3A8MTJ6 420 aaPredicted RBP15.23■□□□□ 0.03
RFFL-211ENST00000584541 MGST3O14880 152 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 GPR37O15354 613 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 XRCC3O43542 346 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L2P0CJ85 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L3P0CJ86 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L4P0CJ87 422 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L5P0CJ88 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L6P0CJ89 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L7P0CJ90 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 SELLP14151 372 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 BRICD5Q6PL45 260 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4L9Q6RFH8 374 aaPredicted RBP15.23■□□□□ 0.03
RFFL-211ENST00000584541 C6orf201Q7Z4U5 140 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 BPIFB2Q8N4F0 458 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 OR4S1Q8NGB4 309 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 ST8SIA4Q92187 359 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DIRAS2Q96HU8 199 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 SSBP3Q9BWW4 388 aaPredicted RBP15.23■□□□□ 0.03
RFFL-211ENST00000584541 PECRQ9BY49 303 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 REG4Q9BYZ8 158 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 EXTL2Q9UBQ6 330 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 DUX4Q9UBX2 424 aa15.23■□□□□ 0.03
RFFL-211ENST00000584541 PRRC2AP48634 2157 aaKnown RBP15.22■□□□□ 0.03
RFFL-211ENST00000584541 PDZD2O15018 2839 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 TRAV18A0A075B6X5 111 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 UBE2QL1A1L167 161 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 RNF223E7ERA6 249 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 CSN2P05814 226 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 HIST1H1DP16402 221 aaKnown RBP15.22■□□□□ 0.03
RFFL-211ENST00000584541 MNDAP41218 407 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 OR3A1P47881 315 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 TMEM50BP56557 158 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 LMO4P61968 165 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 MRPS15P82914 257 aaKnown RBP15.22■□□□□ 0.03
RFFL-211ENST00000584541 LOXL1Q08397 574 aaPredicted RBP15.22■□□□□ 0.03
RFFL-211ENST00000584541 ATXN7L3Q14CW9 347 aaPredicted RBP15.22■□□□□ 0.03
RFFL-211ENST00000584541 WFDC11Q8NEX6 87 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 OR4M1Q8NGD0 313 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 WDFY2Q96P53 400 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 FAAP24Q9BTP7 215 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 SHARPINQ9H0F6 387 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 ETAA1Q9NY74 926 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 TEX15Q9BXT5 2789 aa15.22■□□□□ 0.03
RFFL-211ENST00000584541 ITPR2Q14571 2701 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 SERPINE3A8MV23 424 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 CA11O75493 328 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 GSTP1P09211 210 aaKnown RBP15.21■□□□□ 0.03
RFFL-211ENST00000584541 GNB3P16520 340 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 TNFSF8P32971 234 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 EDDM3BP56851 147 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 EDDM3AQ14507 147 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 CDNFQ49AH0 187 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 PLAC9Q5JTB6 97 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 KRBOX4Q5JUW0 171 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 WDR25Q64LD2 544 aaPredicted RBP15.21■□□□□ 0.03
RFFL-211ENST00000584541 CNIH2Q6PI25 160 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 BAIAP2L2Q6UXY1 529 aa15.21■□□□□ 0.03
RFFL-211ENST00000584541 ZNF841Q6ZN19 808 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms