RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 Q8NAQ8 132 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 DRAXINQ8NBI3 349 aaPredicted RBP1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 CASTOR1Q8WTX7 329 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 C2orf15Q8WU43 125 aaKnown RBP1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 SLC25A44Q96H78 314 aaPredicted RBP1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 BIRC8Q96P09 236 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 PITX2Q99697 317 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 COPS4Q9BT78 406 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 NAGKQ9UJ70 344 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 MMACHCQ9Y4U1 282 aa1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 ZNF706Q9Y5V0 76 aaPredicted RBP1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 POLR3AO14802 1390 aaPredicted RBP1.69□□□□□ -2.14
PPP4R1-227ENST00000583988 CEP170Q5SW79 1584 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 UBDO15205 165 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 PLXNB1O43157 2135 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 PSIP1O75475 530 aaKnown RBP1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 DEDDO75618 318 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 POP7O75817 140 aaKnown RBP1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 MYO1DO94832 1006 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 OPN1SWP03999 348 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 SLC2A1P11166 492 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 CCNOP22674 350 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 GTF2H1P32780 548 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 LGALS7P47929 136 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 TSPAN5P62079 268 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 VSNL1P62760 191 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 STX4Q12846 297 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 ZCWPW2Q504Y3 356 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 MUC7Q8TAX7 377 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 OR5P3Q8WZ94 311 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 ANAPC13Q9BS18 74 aa1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 BRD4O60885 1362 aaPredicted RBP1.68□□□□□ -2.14
PPP4R1-227ENST00000583988 A0A0B4J2C4 111 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 TCF21O43680 179 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 SC5DO75845 299 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 SOX14O95416 240 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 IVLP07476 585 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 CCDC172P0C7W6 258 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 RPA3P35244 121 aaPredicted RBP1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 ATP5J2P56134 94 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 CARD18P57730 90 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 BAXQ07812 192 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 MMDQ15546 238 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 ERICH5Q6P6B1 374 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 OR4K17Q8NGC6 315 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 STACQ99469 402 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 GABARAPL1Q9H0R8 117 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 USH1CQ9Y6N9 552 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 ZNF407Q9C0G0 2248 aa1.67□□□□□ -2.14
PPP4R1-227ENST00000583988 TRBV24-1A0A075B6N3 115 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 IGHV1-45A0A0A0MS14 117 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 TRAV8-3A0A0A6YYJ7 113 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 IGHV2-26A0A0B4J1V2 119 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 RBFOX3A6NFN3 312 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 TMEM250H0YL14 139 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 H3BMM0 161 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 SPOPO43791 374 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 GPR75O95800 540 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 PSKH1P11801 424 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 PSMB9P28065 219 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 NUP62P37198 522 aaPredicted RBP1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 RANBP1P43487 201 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 C2orf80Q0P641 193 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 TNXAQ16473 311 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 TMEM241Q24JQ0 296 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 C18orf21Q32NC0 220 aaPredicted RBP1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 C6orf183Q5T699 404 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 LAMTOR1Q6IAA8 161 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 SSX6Q7RTT6 188 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 OR8G5Q8NG78 346 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 OR8K1Q8NGG5 319 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 OR2K2Q8NGT1 345 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 TWIST2Q8WVJ9 160 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 CACNG8Q8WXS5 425 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 RAD51AP1Q96B01 352 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 UBE2WQ96B02 151 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 FXYD5Q96DB9 178 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 FMC1Q96HJ9 113 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 SUCNR1Q9BXA5 334 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 RBM12B-AS1Q9P1G2 102 aa1.66□□□□□ -2.14
PPP4R1-227ENST00000583988 YLPM1P49750 1951 aaKnown RBP1.65□□□□□ -2.14
PPP4R1-227ENST00000583988 A0A1W2PNM2 257 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 I3L4J1 428 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 hCG_2039718K7EN88 272 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CRXO43186 299 aaPredicted RBP1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 GIMD1P0DJR0 217 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CGB3P0DN86 165 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CGB7P0DN87 165 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CRABP2P29373 138 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 TPBGQ13641 420 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 BCL2A1Q16548 175 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 ACTBL2Q562R1 376 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 HBMQ6B0K9 141 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CYHR1Q6ZMK1 362 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 NIT1Q86X76 327 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 SLC25A45Q8N413 288 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 CMBLQ96DG6 245 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 MSANTD3Q96H12 275 aa1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 ZNF396Q96N95 335 aaPredicted RBP1.65□□□□□ -2.15
PPP4R1-227ENST00000583988 SLC25A31Q9H0C2 315 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms