RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SELENOFO60613 162 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ZNF737O75373 536 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 OR2F2O95006 317 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 SOX14O95416 240 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 IGLV3-1P01715 115 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 HSD17B1P14061 328 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 MPZP25189 248 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.73
VAPA-207ENST00000583879 SLC6A1P30531 599 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 PPP1R8Q12972 351 aaKnown RBP4.22□□□□□ -1.73
VAPA-207ENST00000583879 CASC10Q5T4H9 136 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ZNF684Q5T5D7 378 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 PLCXD3Q63HM9 321 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 THOC7Q6I9Y2 204 aaKnown RBP4.22□□□□□ -1.73
VAPA-207ENST00000583879 DEGS2Q6QHC5 323 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TCF23Q7RTU1 214 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ZNF329Q86UD4 541 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ANGPTL5Q86XS5 388 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 BATF2Q8N1L9 274 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ABHD12Q8N2K0 398 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 OSR2Q8N2R0 312 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ZNF676Q8N7Q3 588 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ASCC1Q8N9N2 400 aaKnown RBP4.22□□□□□ -1.73
VAPA-207ENST00000583879 OR4P4Q8NGL7 312 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 OR51E1Q8TCB6 317 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 SNX22Q96L94 193 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 P2RX4Q99571 388 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TEAD3Q99594 435 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ZNF649Q9BS31 505 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 SLC25A33Q9BSK2 321 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 CLEC7AQ9BXN2 247 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TEX12Q9BXU0 123 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 DGCR6LQ9BY27 220 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 MROQ9BYG7 248 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 PBOV1Q9GZY1 135 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TMEM133Q9H2Q1 129 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 SEBOXQ9HB31 216 aaPredicted RBP4.22□□□□□ -1.73
VAPA-207ENST00000583879 GPR84Q9NQS5 396 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 ARMC1Q9NVT9 282 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 FAM206AQ9NX38 181 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TAS2R1Q9NYW7 299 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 HHLA2Q9UM44 414 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 PIGLQ9Y2B2 252 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 KLHDC2Q9Y2U9 406 aa4.22□□□□□ -1.73
VAPA-207ENST00000583879 TENM3Q9P273 2699 aa4.21□□□□□ -1.73
VAPA-207ENST00000583879 LEUTXA8MZ59 168 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 PTGES3LE9PB15 166 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 PRR23D1E9PI22 279 aaPredicted RBP4.21□□□□□ -1.74
VAPA-207ENST00000583879 F8VVB4 439 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 F8VWA3 439 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 DYNC1I1O14576 645 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 MMP23AO75900 390 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 DHRS3O75911 302 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 IGLV1-47P01700 117 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 PRR23D2P0DMB1 279 aaPredicted RBP4.21□□□□□ -1.74
VAPA-207ENST00000583879 NUP62P37198 522 aaPredicted RBP4.21□□□□□ -1.74
VAPA-207ENST00000583879 HCCSP53701 268 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 PRRX1P54821 245 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 RPL23AP62750 156 aaKnown RBP4.21□□□□□ -1.74
VAPA-207ENST00000583879 BDH1Q02338 343 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 IL24Q13007 206 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 MICAQ29983 383 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 KCTD21Q4G0X4 260 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 C9orf152Q5JTZ5 239 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 CLVS2Q5SYC1 327 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 TMEM42Q69YG0 159 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 OR52W1Q6IF63 320 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 KCTD18Q6PI47 426 aaPredicted RBP4.21□□□□□ -1.74
VAPA-207ENST00000583879 TRAT1Q6PIZ9 186 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 CD300LDQ6UXZ3 194 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 ASRGL1Q7L266 308 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 OR2W3Q7Z3T1 314 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 RTN4RL2Q86UN3 420 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 COMMD2Q86X83 199 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 TPRX1Q8N7U7 411 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 OR52M1Q8NGK5 317 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 MUC7Q8TAX7 377 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 ZNF596Q8TC21 504 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 CREB3L1Q96BA8 519 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 CDRT15Q96T59 188 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 ASCL2Q99929 193 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 NIPSNAP1Q9BPW8 284 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 PKIBQ9C010 78 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 GPR173Q9NS66 373 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 MTCH1Q9NZJ7 389 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.21□□□□□ -1.74
VAPA-207ENST00000583879 LINC00312Q9Y6C7 94 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 U3KQV3 271 aa4.21□□□□□ -1.74
VAPA-207ENST00000583879 DNAH3Q8TD57 4116 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 TRAV34A0A0B4J273 112 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM230AA0A1W2PPH8 454 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A18PA6NE21 464 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 ARRDC5A6NEK1 342 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A16PA6NEW6 464 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A20PA6NIJ5 464 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 A6NIN4 97 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A9PA6NNJ1 464 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A12PA8MX19 464 aa4.2□□□□□ -1.74
VAPA-207ENST00000583879 FAM90A5PA8MXJ8 464 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms