RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 A0A0G2JMP0 313 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 A0A0X1KG70 313 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 M0R1W7 72 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 SLC33A1O00400 549 aaPredicted RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 GEMIN2O14893 280 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 IGHV4-31P0DP07 118 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 GABRR1P24046 479 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 GMFBP60983 142 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 LSM3P62310 102 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 MXD1Q05195 221 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 GRK1Q15835 563 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TAF9Q16594 264 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 CR1LQ2VPA4 569 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TMEM30BQ3MIR4 351 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 PAN3Q58A45 887 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 IDNKQ5T6J7 187 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 HES5Q5TA89 166 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TRAT1Q6PIZ9 186 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 C17orf107Q6ZR85 190 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 NR2C2APQ86WQ0 139 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 GAPTQ8N292 157 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 ASCC1Q8N9N2 400 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TMEM104Q8NE00 496 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TMEM185AQ8NFB2 350 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 OR4M2Q8NGB6 313 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 OR10K1Q8NGX5 313 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 FAM46BQ96A09 425 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 ISOC1Q96CN7 298 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 SEH1LQ96EE3 360 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 S100A16Q96FQ6 103 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 DCTN5Q9BTE1 182 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 DPCDQ9BVM2 203 aaPredicted RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 LPAR5Q9H1C0 372 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 ABCG5Q9H222 651 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 DIABLOQ9NR28 239 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 TAS2R3Q9NYW6 316 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 CCDC59Q9P031 241 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 RPUSD1Q9UJJ7 312 aaKnown RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 UBE2J1Q9Y385 318 aaPredicted RBP7.73□□□□□ -1.17
UBBP4-201ENST00000583708 KPTNQ9Y664 436 aa7.73□□□□□ -1.17
UBBP4-201ENST00000583708 A0A075B6Q4 140 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 TRAV24A0A0B4J272 114 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 IGHV2-70DA0A0C4DH43 119 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 TMEM272A0A1B0GTI8 110 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 TMEM82A0PJX8 343 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 SERPINE3A8MV23 424 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 H3BMQ9 156 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 TGFAP01135 160 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 APOA1P02647 267 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 NDUFB7P17568 137 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 BLVRBP30043 206 aaPredicted RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 OR3A1P47881 315 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 P2RX3P56373 397 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 RPL31P62899 125 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PITPNAQ00169 270 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PAX2Q02962 417 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PAX8Q06710 450 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 SCN1BQ07699 218 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 HNRNPA0Q13151 305 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 UNC119Q13432 240 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 SRSF7Q16629 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PIGYQ3MUY2 71 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 Q6ZTK2 550 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 BTN2A1Q7KYR7 527 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 FAM216BQ8N7L0 139 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 SUMF2Q8NBJ7 301 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 ZNRF1Q8ND25 227 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 C19orf18Q8NEA5 215 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 OR10A7Q8NGE5 316 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 ST8SIA4Q92187 359 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 DACT3Q96B18 629 aaPredicted RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 MSI2Q96DH6 328 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 NAA50Q9GZZ1 169 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 RBM38Q9H0Z9 239 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 BANF2Q9H503 90 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 NARFLQ9H6Q4 476 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 RNF167Q9H6Y7 350 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 LINC00574Q9H8X3 128 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 UNKLQ9H9P5 680 aaKnown RBP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PLEKHJ1Q9NW61 149 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 CTSZQ9UBR2 303 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 KCNS2Q9ULS6 477 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 INSIG2Q9Y5U4 225 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PEX16Q9Y5Y5 336 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 LINC00312Q9Y6C7 94 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 MED13LQ71F56 2210 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.72□□□□□ -1.17
UBBP4-201ENST00000583708 HIVEP1P15822 2718 aa7.72□□□□□ -1.17
UBBP4-201ENST00000583708 ABCA1O95477 2261 aa7.71□□□□□ -1.17
UBBP4-201ENST00000583708 CSPG4Q6UVK1 2322 aa7.71□□□□□ -1.18
UBBP4-201ENST00000583708 TRGV10A0A0A0MS01 117 aa7.71□□□□□ -1.18
UBBP4-201ENST00000583708 TRBV6-6A0A0A6YYG2 114 aa7.71□□□□□ -1.18
UBBP4-201ENST00000583708 TMEM30CPA0ZSE6 113 aa7.71□□□□□ -1.18
UBBP4-201ENST00000583708 CCDC160A6NGH7 325 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms