RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 HILS1P60008 231 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ERVK11-1P61568 191 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 LMO4P61968 165 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 LSM6P62312 80 aaKnown RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 DYNLL1P63167 89 aaKnown RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 TLE4Q04727 773 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TCP10Q12799 353 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 MLLT11Q13015 90 aaPredicted RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 HTR4Q13639 388 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 SURF2Q15527 256 aaPredicted RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 HMGN3Q15651 99 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TMEM255AQ5JRV8 349 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR2T5Q6IEZ7 315 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 C1orf94Q6P1W5 598 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 FAHD1Q6P587 224 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ULK3Q6PHR2 472 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OAFQ86UD1 273 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 STK40Q8N2I9 435 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 JAGN1Q8N5M9 183 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 EID2Q8N6I1 236 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 UBAC2Q8NBM4 344 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 CCDC54Q8NEL0 328 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR5M1Q8NGP8 315 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR13C9Q8NGT0 318 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR2T29Q8NH02 315 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 NPRL2Q8WTW4 380 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TM4SF18Q96CE8 201 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 PYURFQ96I23 114 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TSSK3Q96PN8 268 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 OR2A7Q96R45 310 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TAAR1Q96RJ0 339 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 S100A13Q99584 98 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TEAD3Q99594 435 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ACBD6Q9BR61 282 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 SUCNR1Q9BXA5 334 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 SRXN1Q9BYN0 137 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ELOVL4Q9GZR5 314 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ARL6Q9H0F7 186 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ABCG5Q9H222 651 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TUBB1Q9H4B7 451 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 NMNAT1Q9HAN9 279 aaPredicted RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 ZNF302Q9NR11 478 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 AIG1Q9NVV5 245 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 TXNL4BQ9NX01 149 aaKnown RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 OR1A1Q9P1Q5 309 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 FIS1Q9Y3D6 152 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 HES2Q9Y543 173 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 MTCH2Q9Y6C9 303 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 ZFC3H1O60293 1989 aaKnown RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 TP53BP1Q12888 1972 aaPredicted RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 OTOFQ9HC10 1997 aa3.82□□□□□ -1.8
SS18-223ENST00000583595 GOLGB1Q14789 3259 aaKnown RBP3.82□□□□□ -1.8
SS18-223ENST00000583595 KIR2DL5BA0A0G2JN68 375 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 KIR2DL5BA0A0G2JPC4 375 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 A0A1B0GU03 582 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 SNRPGP15A8MWD9 76 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 TMEM238C9JI98 176 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 RPL36A-HNRNPH2H7BZ11 118 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 K7EP13 123 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 ZNF593O00488 134 aaPredicted RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 HLA-HP01893 362 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 PPBPP02775 128 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 IL5P05113 134 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 SLC35E2P0CK97 266 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 CCL2P13500 99 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 ZNF35P13682 527 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 RAB5AP20339 215 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 PMCHP20382 165 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 CCNOP22674 350 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 MAS1LP35410 378 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 CD200P41217 278 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 GPR1P46091 355 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 TFPI2P48307 235 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 POLR2JP52435 117 aaKnown RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 OR2B8PP59922 312 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 RPL32P62910 135 aaKnown RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 CDK6Q00534 326 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 TSPAN31Q12999 210 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 EIF4EBP2Q13542 120 aaPredicted RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 C1DQ13901 141 aaKnown RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 DEFB115Q30KQ5 88 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 SCGB2B2Q4G0G5 96 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 PAGE3Q5JUK9 113 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 IDNKQ5T6J7 187 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 FBXW9Q5XUX1 488 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 IL34Q6ZMJ4 242 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 RNF165Q6ZSG1 346 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 TIPARPQ7Z3E1 657 aaKnown RBP3.81□□□□□ -1.8
SS18-223ENST00000583595 KIR2DL5AQ8N109 375 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 OR6V1Q8N148 313 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 SLC39A11Q8N1S5 342 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 OR2D3Q8NGH3 330 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 OR10A6Q8NH74 314 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 ZNF502Q8TBZ5 544 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 GNPDA2Q8TDQ7 276 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 C16orf78Q8WTQ4 265 aa3.81□□□□□ -1.8
SS18-223ENST00000583595 ING5Q8WYH8 240 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms