RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 KANTRA0A1W2PQU2 76 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CEACAM18A8MTB9 384 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 IDSB3KWA1 339 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 H0Y8G0 127 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 GOSR2O14653 212 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CHEK1O14757 476 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 RTL8CO15255 209 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 P2RX6O15547 441 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CLN5O75503 358 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SIX6O95475 246 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 RAB3DO95716 219 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 APOC1P02654 83 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 APOC3P02656 99 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 RLN2P04090 185 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CD3DP04234 171 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 IFNA4P05014 189 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ISG15P05161 165 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CA3P07451 260 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CT62P0C5K7 136 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF35P13682 527 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 GTF2F2P13984 249 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 FOLR2P14207 255 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 FOSL2P15408 326 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 IGFBP3P17936 291 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ZBTB25P24278 435 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 PAX6P26367 422 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SRD5A2P31213 254 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 DLSTP36957 453 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 TAGLN2P37802 199 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 NAA10P41227 235 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 EMDP50402 254 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 RAB13P51153 203 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CCL11P51671 97 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 MAZP56270 477 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 CLDN12P56749 244 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 PPIAP62937 165 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 HERV-K104P63124 156 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 RPS21P63220 83 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 DEFB103AP81534 67 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SCRN3Q0VDG4 424 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 MEF2DQ14814 521 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC17A1Q14916 467 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 PDGFRLQ15198 375 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 TSC22D1Q15714 1073 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 C1orf100Q5SVJ3 147 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 DRAM2Q6UX65 266 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM184AQ6ZMB5 413 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 BIVMQ86UB2 503 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SKA3Q8IX90 412 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 OR4N5Q8IXE1 308 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 GABRG1Q8N1C3 465 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SVBPQ8N300 66 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 PRSS35Q8N3Z0 413 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ZDHHC22Q8N966 263 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC30A7Q8NEW0 376 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 OR1M1Q8NGA1 313 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 OR51D1Q8NGF3 324 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 OR1L3Q8NH93 324 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 STOML3Q8TAV4 291 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 MITD1Q8WV92 249 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ASB17Q8WXJ9 295 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 FAM3DQ96BQ1 224 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF707Q96C28 371 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 Q96M85 177 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 NMNAT3Q96T66 252 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 GINS4Q9BRT9 223 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SEC11CQ9BY50 192 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC17A9Q9BYT1 436 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 POTEKPQ9BYX7 375 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 COMMD4Q9H0A8 199 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 FXYD6Q9H0Q3 95 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 MTIF3Q9H2K0 278 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ADAP2Q9NPF8 381 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 COMMD9Q9P000 198 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 ZMAT5Q9UDW3 170 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 SHPKQ9UHJ6 478 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 TBX21Q9UL17 535 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 LTBP2Q14767 1821 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 MDC1Q14676 2089 aaKnown RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 NINQ8N4C6 2090 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 TET1Q8NFU7 2136 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 IGKV1D-42A0A075B6H8 117 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 TRAV8-7A0A075B6U6 113 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 NPIPA5A0A0B4J1W7 369 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM72A0PK05 275 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 C9orf170A2RU37 121 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF860A6NHJ4 632 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 FAM74A7A6NL05 159 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 OR52A4PA6NMU1 304 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 HIDE1A8MVS5 230 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 FAM25EA8MYX2 175 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 NPIPA7E9PJI5 369 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 F8W036 122 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 H0YGG7 62 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 PHOX2AO14813 284 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 SYT7O43581 403 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms