RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PPP1R32Q7Z5V6 425 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 SLC35G3Q8N808 338 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 NAXEQ8NCW5 288 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 P2RX4Q99571 388 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 FAAP24Q9BTP7 215 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 TUBD1Q9UJT1 453 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 RNF222A6NCQ9 220 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 ERVH48-1M5A8F1 160 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 PRRG2O14669 202 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 KITLGP21583 273 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 TMEM104Q8NE00 496 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 BPIFCQ8NFQ6 507 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 MTCL1Q9Y4B5 1905 aaKnown RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 NUP214P35658 2090 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 F8VVB4 439 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 F8VWA3 439 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 SYNGR3O43761 229 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 PRKNO60260 465 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 ACTL6BO94805 426 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 TMIGD3P0DMS9 266 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 PTAFRP25105 342 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 MST1P26927 711 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 SNCAP37840 140 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 ZP1P60852 638 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 H1FOOQ8IZA3 346 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 CMBLQ96DG6 245 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 ZNF385AQ96PM9 386 aaKnown RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 SPACA5Q96QH8 159 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 hCG_38984A0A1B0GV85 526 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 MKRN2OSH3BPM6 223 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 SPRY1O43609 319 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 NME2P1O60361 137 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 OR5AC1P0C628 307 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 SFTA3P0C7M3 94 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 CBR1P16152 277 aa5.09□□□□□ -1.59
RTTN-209ENST00000583043 PSMG3Q9BT73 122 aaPredicted RBP5.09□□□□□ -1.59
RTTN-209ENST00000583043 ELOA3CA0A087WX78 387 aaPredicted RBP5.09□□□□□ -1.6
RTTN-209ENST00000583043 ARGFXA6NJG6 315 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 SYNGR2O43760 224 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 SRSF10O75494 262 aaKnown RBP5.09□□□□□ -1.6
RTTN-209ENST00000583043 NGFP01138 241 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 METTL15P1P0C7V9 234 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 ZNF674Q2M3X9 581 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 ZNF385CQ66K41 422 aaPredicted RBP5.09□□□□□ -1.6
RTTN-209ENST00000583043 ASCL4Q6XD76 172 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 GVQW1Q8N7I0 195 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 RELL2Q8NC24 303 aaPredicted RBP5.09□□□□□ -1.6
RTTN-209ENST00000583043 DMBX1Q8NFW5 382 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 TIMP4Q99727 224 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 TTTY12Q9BZ98 90 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 TIMM9Q9Y5J7 89 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 WSB1Q9Y6I7 421 aa5.09□□□□□ -1.6
RTTN-209ENST00000583043 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 OTX1P32242 354 aaPredicted RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 GABRA2P47869 451 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 IDH3GP51553 393 aaPredicted RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 GPM6AP51674 278 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 ZNF787Q6DD87 383 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 OR11H4Q8NGC9 324 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 SFT2D1Q8WV19 159 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 TMEM74BQ9NUR3 256 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 FOXD3Q9UJU5 478 aaPredicted RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 TRBV6-6A0A0A6YYG2 114 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 HSD17B6O14756 317 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 ANGPTL7O43827 346 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 ZNF735P0CB33 412 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 CCL4P13236 92 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 F2RP25116 425 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 H2BFSP57053 126 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 TFF2Q03403 129 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 UNC119Q13432 240 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 KRTCAP3Q53RY4 240 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 SFRP5Q5T4F7 317 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 VSTM2AQ8TAG5 236 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 RPUSD4Q96CM3 377 aaKnown RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 GFI1Q99684 422 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 Q9N2K0 584 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 TRGV10A0A0A0MS01 117 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 SHISA8B8ZZ34 492 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 WDR1O75083 606 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 OPN1MWP04001 364 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 OPN1MW2P0DN77 364 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 OPN1MW3P0DN78 364 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 P2RY4P51582 365 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 LYPD8Q6UX82 237 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 SFTPA2Q8IWL1 248 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 GCSAMQ8N6F7 178 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 RSRP1Q9BUV0 290 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 WNT5BQ9H1J7 359 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 HEYLQ9NQ87 328 aaPredicted RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 IGHV3-15A0A0B4J1V0 119 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 CLDN34H7C241 214 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 AGPAT2O15120 278 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 FGF16O43320 207 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 HSPB1P04792 205 aaKnown RBP5.08□□□□□ -1.6
RTTN-209ENST00000583043 ZNF708P17019 499 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 PRAMEF5Q5TYX0 476 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 PRAMEF6Q5VXH4 476 aa5.08□□□□□ -1.6
RTTN-209ENST00000583043 ASCL5Q7RTU5 278 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms