RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PRTN3P24158 256 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 RAB25P57735 213 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 PYDC2Q56P42 97 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 ZFP82Q8N141 532 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 SPICQ8N5J4 248 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 CDRT4Q8N9R6 151 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 TWIST2Q8WVJ9 160 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 CCL17Q92583 94 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 ZMYND19Q96E35 227 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 LINC01587Q99440 93 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 APOL4Q9BPW4 351 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 SLC25A31Q9H0C2 315 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 C14orf166Q9Y224 244 aaKnown RBP2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 RIMBP3CA6NJZ7 1639 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 RIMBP3BA6NNM3 1639 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 RIMBP3Q9UFD9 1639 aa2.27□□□□□ -2.05
SMCHD1-205ENST00000581383 IFT140Q96RY7 1462 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 NOS1P29475 1434 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 SSH2Q76I76 1423 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 IGKV1D-33P01593 117 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 IGKV1-33P01594 117 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 IGHMP01871 453 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 APOA1P02647 267 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 CECR9P0C854 216 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 MLNP12872 115 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 LGALS7P47929 136 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 GCLMP48507 274 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 TSPAN5P62079 268 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 TRIP13Q15645 432 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 GLYATQ6IB77 296 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 DPPA2Q7Z7J5 298 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 OR4K17Q8NGC6 315 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 OR2AE1Q8NHA4 323 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 ACTL9Q8TC94 416 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 CATSPER2Q96P56 530 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 GABARAPL1Q9H0R8 117 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 TXNIPQ9H3M7 391 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 IFT46Q9NQC8 304 aa2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF230Q9UIE0 474 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 POLA1P09884 1462 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-205ENST00000581383 DNMBPQ6XZF7 1577 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 IGHV3-21A0A0B4J1V1 117 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 IGHV3-43A0A0B4J1X8 118 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 PGPA6NDG6 321 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 LEUTXA8MZ59 168 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 F5H5P2 479 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 M0QXV9 152 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 SHOX2O60902 331 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 CST4P01036 141 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 S100A2P29034 98 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 TGFBR2P37173 567 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 MAGEA3P43357 314 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 TTPAP49638 278 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF83P51522 516 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 STX3Q13277 289 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 TRAM1Q15629 374 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF141Q15928 474 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 NXNL2Q5VZ03 156 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 AMMECR1LQ6DCA0 310 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 WDR59Q6PJI9 974 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 Q6ZT83 130 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 C10orf107Q8IVU9 208 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 OR2M3Q8NG83 312 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 TMEM239Q8WW34 195 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 OLFM3Q96PB7 478 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 ABCG5Q9H222 651 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF586Q9NXT0 402 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 CUX1P39880 1505 aa2.25□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF407Q9C0G0 2248 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 TRAV8-3A0A0A6YYJ7 113 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 MYBPHLA2RUH7 354 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF729A6NN14 1252 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 A8MWP4 228 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 PSIP1O75475 530 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 FBXO48Q5FWF7 155 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 TMEM215Q68D42 235 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF470Q6ECI4 717 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 USP50Q70EL3 339 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 MARCH3Q86UD3 253 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 IFT81Q8WYA0 676 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 OR5P2Q8WZ92 322 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 TMIGD2Q96BF3 282 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 C19orf60Q96EN9 201 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 IGF2BP2-AS1Q96M15 143 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 BIRC8Q96P09 236 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 PITX2Q99697 317 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 GOLPH3Q9H4A6 298 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 RHOFQ9HBH0 211 aa2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 MRM2Q9UI43 246 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-205ENST00000581383 ERCC6L2Q5T890 1561 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 ZBED9Q6R2W3 1325 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CHD1O14646 1710 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 ZNF879B4DU55 563 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CPSF4O95639 269 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 SLC2A1P11166 492 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 GTF2F2P13984 249 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 GTF2H1P32780 548 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms