RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 VSIG4Q9Y279 399 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 FAM74A7A6NL05 159 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 P01737 135 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 ORM2P19652 201 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 MEOX1P50221 254 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 PRRX1P54821 245 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 A0A1W2PQD3 144 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF716A6NP11 495 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 PRSS1P07477 247 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 MYF5P13349 255 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 CD99P14209 185 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
CSNK1D-217ENST00000581241 METTL12A8MUP2 240 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 TCL1AP56279 114 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 B2MP61769 119 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 PSG5Q15238 335 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 BHLHA9Q7RTU4 235 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 GAPTQ8N292 157 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 MRGPRX3Q96LB0 322 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 WDR13Q9H1Z4 485 aa12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 PCDHGA9Q9Y5G4 932 aaKnown RBP12.83□□□□□ -0.35
CSNK1D-217ENST00000581241 CXorf1O96002 111 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 PGA4P0DJD7 388 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 PGA5P0DJD9 388 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 SEC11BP0C7V7 166 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 UBE2V2Q15819 145 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 DTD1Q8TEA8 209 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 C1QTNF12Q5T7M4 302 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 NSUN5P2Q63ZY6 315 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 VASH2Q86V25 355 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 OR10D3Q8NH80 312 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 IL17BQ9UHF5 180 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 TMEM251Q8N6I4 163 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 GNRHR2Q96P88 292 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 FLRT3Q9NZU0 649 aa12.83□□□□□ -0.36
CSNK1D-217ENST00000581241 hADV38S2A0JD32 116 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 CSN3P07498 182 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 POU2F2P09086 479 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 ACP1P24666 158 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 SRP14P37108 136 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 P4HTMQ9NXG6 502 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 WASHC3Q9Y3C0 194 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 HLA-BQ31612 363 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 BPIFA4PQ86YQ2 179 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 ZNF83P51522 516 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 YBX1P67809 324 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 C21orf62-AS1Q17RA5 79 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 ZNF880Q6PDB4 577 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 CLEC5AQ9NY25 188 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 A0A1B0GU03 582 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 PAGE4O60829 102 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 GABRG2P18507 467 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 SUCLG1P53597 346 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 RPS4XP62701 263 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 ZNF552Q9H707 407 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 A0A1W2PR80 420 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 CYR61O00622 381 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 SMPD2O60906 423 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 AREGP15514 252 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 PMELP40967 661 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 TMEM50BP56557 158 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 KLK13Q9UKR3 277 aa12.82□□□□□ -0.36
CSNK1D-217ENST00000581241 ISLRO14498 428 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 CCL2P13500 99 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 FOXQ1Q9C009 403 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 ST6GALNAC2Q9UJ37 374 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 NKX2-6A6NCS4 301 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 CXCL2P19875 107 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 LSM6P62312 80 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 TMEM91Q6ZNR0 172 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 GPBAR1Q8TDU6 330 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 PPYP01298 95 aa12.81□□□□□ -0.36
CSNK1D-217ENST00000581241 HOXB3P14651 431 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms