RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 J3QLW9 94 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 ZFPL1O95159 310 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 CGB3P0DN86 165 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 CGB7P0DN87 165 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 ZNF19P17023 458 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 DYNC1I2Q13409 638 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 IL13RA2Q14627 380 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 KPNB1Q14974 876 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 NHLRC3Q5JS37 347 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 OR51A4Q8NGJ6 313 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 OR13C9Q8NGT0 318 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 OR5AK2Q8NH90 309 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 CHST6Q9GZX3 395 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 IFT22Q9H7X7 185 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 IL36RNQ9UBH0 155 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 FOXJ3Q9UPW0 622 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 GSTK1Q9Y2Q3 226 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 LOC100130705A0A1B0GUX0 176 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 PTGFRP43088 359 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 GBX2P52951 348 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 WFDC9Q8NEX5 89 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 OR10AC1Q8NH08 325 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 NDNFQ8TB73 568 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 OCSTAMPQ9BR26 566 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 FGF20Q9NP95 211 aaPredicted RBP11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 IL36GQ9NZH8 169 aa11.63□□□□□ -0.55
SMARCE1-216ENST00000580419 KBTBD11-OT1A0A1B0GTJ5 212 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 IRGMA1A4Y4 181 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 LY6LH3BQJ8 138 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 H3BSH0 61 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 OR2F2O95006 317 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 CD2P06729 351 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 CDK2P24941 298 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 PAX6P26367 422 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 DCKP27707 260 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 DUSP1P28562 367 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 RAB13P51153 203 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 PRRX1P54821 245 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 CD83Q01151 205 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 SLC34A1Q06495 639 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 HLA-DRB5Q30154 266 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 ZNF691Q5VV52 312 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 CCDC121Q6ZUS5 278 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 LHFPL3Q86UP9 236 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 PQLC1Q8N2U9 271 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 COQ2Q96H96 371 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 C8orf4Q9NR00 106 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM118AQ9NWS6 357 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 DHDHQ9UQ10 334 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 HILPDAQ9Y5L2 63 aa11.62□□□□□ -0.55
SMARCE1-216ENST00000580419 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 SIRPB1O00241 398 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 DEGS1O15121 323 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 MAGEB3O15480 346 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 MMP23AO75900 390 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 TMEM225BP0DP42 221 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 ZNF44P15621 663 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 RAB3AP20336 220 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 GLIPR1P48060 266 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 AESQ08117 197 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 KRBOX4Q5JUW0 171 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 LINC00596Q86U02 117 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 TMEM219Q86XT9 240 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 TPRX1Q8N7U7 411 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 OR52I1Q8NGK6 324 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 RBM14Q96PK6 669 aaKnown RBP11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 NKX3-1Q99801 234 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 BARHL1Q9BZE3 327 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 S100A14Q9HCY8 104 aa11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 PAK1IP1Q9NWT1 392 aaPredicted RBP11.61□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A18PA6NE21 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A16PA6NEW6 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A20PA6NIJ5 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A9PA6NNJ1 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A12PA8MX19 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A5PA8MXJ8 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 NPIPB11E5RHQ5 1161 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 PEX14O75381 377 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 GPX5O75715 221 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 HCKP08631 526 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A15PP0C7V4 464 aa11.6□□□□□ -0.55
SMARCE1-216ENST00000580419 FAM90A13PP0C7W8 464 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms