RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TBC1D28Q2M2D7 210 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR2T2Q6IF00 324 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C6orf201Q7Z4U5 140 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CSNK2A3Q8NEV1 391 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR5H2Q8NGV7 314 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RND1Q92730 232 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MEMO1Q9Y316 297 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 IGHV1-18A0A0C4DH31 117 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C13orf42A0A1B0GVH6 325 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C3orf80F5H4A9 247 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MFNGO00587 321 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NRASP01111 189 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CPT2P23786 658 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CBX5P45973 191 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MRPL21Q7Z2W9 205 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RASL12Q9NYN1 266 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 GHRLQ9UBU3 117 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
CDK5RAP3-217ENST00000580287 IGKV1-27A0A075B6S5 117 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF850A8MQ14 1090 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 M0R1B8 84 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RPL35P42766 123 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 LUMP51884 338 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SNU13P55769 128 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 UBA52P62987 128 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FGL1Q08830 312 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CNN3Q15417 329 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MPPED2Q15777 294 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TAF9Q16594 264 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C1orf162Q8NEQ5 155 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C10orf35Q96D05 121 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 VKORC1Q9BQB6 163 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PECRQ9BY49 303 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZNF581Q9P0T4 197 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 XRCC2O43543 280 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CA7P43166 264 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RBP2P50120 134 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PLCXD3Q63HM9 321 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ELP2Q6IA86 826 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MOB3CQ70IA8 216 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC25A42Q86VD7 318 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR5M8Q8NGP6 311 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DNTTIP1Q9H147 329 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 METTL9Q9H1A3 318 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TAS2R3Q9NYW6 316 aa10.85□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SPTBN1Q01082 2364 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 A0A1B0GW55 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SMPD2O60906 423 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L2P0CJ85 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L3P0CJ86 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L4P0CJ87 422 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L5P0CJ88 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L6P0CJ89 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4L7P0CJ90 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TBPP20226 339 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 UQCRFS1P47985 274 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 UCP2P55851 309 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 MALLQ13021 153 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR8B8Q15620 311 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 UNQ6126/PRO20091Q6UXV3 157 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 Q6ZSR3 168 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZDHHC22Q8N966 263 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 OR1J1Q8NGS3 322 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SPSB1Q96BD6 273 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PHB2Q99623 299 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 USB1Q9BQ65 265 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 PAPOLGQ9BWT3 736 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 EHFQ9NZC4 300 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DUX4Q9UBX2 424 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ESPL1Q14674 2120 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 C9orf170A2RU37 121 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SMAD7O15105 426 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 ZBTB25P24278 435 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 GRNP28799 593 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 HOXA1P49639 335 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 AKR1D1P51857 326 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CHRFAM7AQ494W8 412 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 DPPA2Q7Z7J5 298 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TMEM17Q86X19 198 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CCDC36Q8IYA8 594 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FAM89BQ8N5H3 189 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 TERB2Q8NHR7 220 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC25A40Q8TBP6 338 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 NARS2Q96I59 477 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 FGF23Q9GZV9 251 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 SLC7A11Q9UPY5 501 aa10.84□□□□□ -0.67
CDK5RAP3-217ENST00000580287 HIVEP3Q5T1R4 2406 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms